Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   IP614_RS26935 Genome accession   NZ_CP063975
Coordinates   5307729..5308523 (-) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus cereus strain N435-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 5302729..5313523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IP614_RS26910 - 5303253..5305325 (-) 2073 WP_050822105.1 sigma-54-dependent Fis family transcriptional regulator -
  IP614_RS26915 - 5305463..5305696 (+) 234 WP_001190214.1 DUF2627 domain-containing protein -
  IP614_RS26920 - 5305746..5306474 (-) 729 WP_000172572.1 glycerophosphodiester phosphodiesterase -
  IP614_RS26925 - 5306525..5306671 (+) 147 WP_001247671.1 YycC family protein -
  IP614_RS26930 - 5306964..5307476 (-) 513 Protein_5268 PRK06770 family protein -
  IP614_RS26935 spo0A 5307729..5308523 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  IP614_RS26940 spoIVB 5308814..5310112 (-) 1299 WP_002098091.1 SpoIVB peptidase -
  IP614_RS26945 recN 5310231..5311970 (-) 1740 WP_242785078.1 DNA repair protein RecN Machinery gene
  IP614_RS26950 argR 5312235..5312684 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=498242 IP614_RS26935 WP_021727703.1 5307729..5308523(-) (spo0A) [Bacillus cereus strain N435-1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=498242 IP614_RS26935 WP_021727703.1 5307729..5308523(-) (spo0A) [Bacillus cereus strain N435-1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTTGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818