Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   IP614_RS26085 Genome accession   NZ_CP063975
Coordinates   5156089..5156523 (-) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus strain N435-1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 5151089..5161523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IP614_RS26070 - 5152299..5152824 (+) 526 Protein_5096 PadR family transcriptional regulator -
  IP614_RS26075 metE 5153336..5155624 (+) 2289 WP_001007600.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  IP614_RS26080 comJ 5155663..5156052 (-) 390 WP_000424030.1 competence protein ComJ -
  IP614_RS26085 nucA/comI 5156089..5156523 (-) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  IP614_RS26090 - 5156750..5157499 (+) 750 WP_000388476.1 DUF3967 domain-containing protein -
  IP614_RS26095 kinB 5157538..5158812 (-) 1275 WP_000420368.1 sporulation sensor histidine kinase KinB -
  IP614_RS26100 - 5159124..5159324 (+) 201 WP_000929286.1 hypothetical protein -
  IP614_RS26105 - 5159446..5160609 (+) 1164 WP_000434583.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=498241 IP614_RS26085 WP_000811494.1 5156089..5156523(-) (nucA/comI) [Bacillus cereus strain N435-1]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=498241 IP614_RS26085 WP_000811494.1 5156089..5156523(-) (nucA/comI) [Bacillus cereus strain N435-1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGCGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGCGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549