Detailed information NTG0498095

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IGI31_RS20795
• Genome accession: NZ_CP075465
• Coordinates: 4341859..4342884 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NT1N34
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4336859..4347884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGI31_RS20775	metJ	4337920..4338237 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
IGI31_RS20780	yiiX	4338421..4339029 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
IGI31_RS20785	rpmE	4339090..4339302 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
IGI31_RS20790	priA	4339505..4341703 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
IGI31_RS20795	cytR	4341859..4342884 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
IGI31_RS20800	ftsN	4342976..4343935 (+)	960	WP_000068828.1	cell division protein FtsN	-
IGI31_RS20805	hslV	4344028..4344558 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
IGI31_RS20810	hslU	4344568..4345899 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
IGI31_RS20815	menA	4345966..4346892 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IGI31_RS20820	rraA	4346985..4347470 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IGI31_RS20825	zapB	4347555..4347800 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=498095 IGI31_RS20795 WP_000644904.1 4341859..4342884(+) (cytR) [Escherichia coli strain NT1N34]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=498095 IGI31_RS20795 WP_000644904.1 4341859..4342884(+) (cytR) [Escherichia coli strain NT1N34]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628