Detailed information NTG0497937

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KIB02_RS22670
• Genome accession: NZ_CP075374
• Coordinates: 4705663..4706688 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain no107
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4700663..4711688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIB02_RS22650 (KIB02_22655)	metJ	4701724..4702041 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KIB02_RS22655 (KIB02_22660)	yiiX	4702225..4702833 (+)	609	WP_000797344.1	YiiX family permuted papain-like enzyme	-
KIB02_RS22660 (KIB02_22665)	rpmE	4702894..4703106 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KIB02_RS22665 (KIB02_22670)	priA	4703309..4705507 (+)	2199	WP_001395720.1	primosomal protein N'	Machinery gene
KIB02_RS22670 (KIB02_22675)	cytR	4705663..4706688 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KIB02_RS22675 (KIB02_22680)	ftsN	4706780..4707739 (+)	960	WP_000068834.1	cell division protein FtsN	-
KIB02_RS22680 (KIB02_22685)	hslV	4707832..4708362 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KIB02_RS22685 (KIB02_22690)	hslU	4708372..4709703 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
KIB02_RS22690 (KIB02_22695)	menA	4709770..4710696 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KIB02_RS22695 (KIB02_22700)	rraA	4710789..4711274 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KIB02_RS22700 (KIB02_22705)	zapB	4711359..4711604 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=497937 KIB02_RS22670 WP_000644904.1 4705663..4706688(+) (cytR) [Escherichia coli strain no107]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=497937 KIB02_RS22670 WP_000644904.1 4705663..4706688(+) (cytR) [Escherichia coli strain no107]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628