Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   KIL00_RS19755 Genome accession   NZ_CP075344
Coordinates   3770518..3771651 (-) Length   377 a.a.
NCBI ID   WP_003227715.1    Uniprot ID   P70962
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3765518..3776651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS19715 (KIL00_19715) ywnA 3765694..3766095 (-) 402 WP_003227734.1 Rrf2 family transcriptional regulator -
  KIL00_RS19720 (KIL00_19720) ureC 3766230..3767939 (-) 1710 WP_003243090.1 urease subunit alpha -
  KIL00_RS19725 (KIL00_19725) ureB 3767936..3768310 (-) 375 WP_003227726.1 urease subunit beta -
  KIL00_RS19730 (KIL00_19730) ureA 3768307..3768624 (-) 318 WP_014478236.1 urease subunit gamma -
  KIL00_RS19735 (KIL00_19735) - 3768805..3768933 (-) 129 Protein_3843 hypothetical protein -
  KIL00_RS22265 - 3769240..3769408 (-) 169 Protein_3844 urea ABC transporter substrate-binding protein -
  KIL00_RS19745 (KIL00_19745) csbD 3769621..3769809 (-) 189 WP_014481173.1 stress response protein CsbD -
  KIL00_RS19750 (KIL00_19750) - 3769883..3770362 (-) 480 WP_003244390.1 hypothetical protein -
  KIL00_RS19755 (KIL00_19755) rapC 3770518..3771651 (-) 1134 WP_003227715.1 response regulator aspartate phosphatase RapB Regulator
  KIL00_RS19760 (KIL00_19760) moaA 3771843..3772868 (-) 1026 WP_015483814.1 GTP 3',8-cyclase MoaA -
  KIL00_RS19765 (KIL00_19765) fdhD 3772884..3773672 (-) 789 WP_014481178.1 formate dehydrogenase accessory sulfurtransferase FdhD -
  KIL00_RS19770 (KIL00_19770) - 3773905..3774066 (-) 162 WP_003227706.1 hypothetical protein -
  KIL00_RS19775 (KIL00_19775) ywmD 3774161..3774835 (-) 675 WP_014481179.1 VWA domain-containing protein -
  KIL00_RS19780 (KIL00_19780) - 3774888..3775028 (-) 141 WP_014481180.1 hypothetical protein -
  KIL00_RS19785 (KIL00_19785) ywmC 3775159..3775842 (-) 684 WP_014481181.1 VWA domain-containing protein -

Sequence

Protein


Download         Length: 377 a.a.        Molecular weight: 45037.17 Da        Isoelectric Point: 4.8005

>NTDB_id=497853 KIL00_RS19755 WP_003227715.1 3770518..3771651(-) (rapC) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=497853 KIL00_RS19755 WP_003227715.1 3770518..3771651(-) (rapC) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAGGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTATAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCACTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTAATCGGATCAGCCCTTTATAACATTGGGAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGCT
TATATGAAGTATGA

Domains

Predicted by InterProScan.

MalT-like TPR region (TPR_MalT)

(154-305)

response regulator aspartate phosphatase H, N terminal (RapH_N)

(6-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P70962

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

42.632

100

0.43
  rapF Bacillus subtilis subsp. subtilis str. 168

42.667

99.469

0.424