Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KIL00_RS09680 Genome accession   NZ_CP075344
Coordinates   1917360..1917977 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1912360..1922977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS09655 (KIL00_09655) yndJ 1912681..1914321 (+) 1641 WP_014479931.1 YndJ family protein -
  KIL00_RS09660 (KIL00_09660) - 1914411..1914725 (+) 315 Protein_1855 hypothetical protein -
  KIL00_RS09665 (KIL00_09665) pghL 1914950..1915708 (+) 759 WP_213783616.1 poly-gamma-glutamate hydrolase family protein -
  KIL00_RS09670 (KIL00_09670) - 1915735..1916184 (-) 450 WP_014479935.1 YndM family protein -
  KIL00_RS09675 (KIL00_09675) fosM 1916393..1916818 (+) 426 Protein_1858 FosM family fosfomycin resistance protein -
  KIL00_RS09680 (KIL00_09680) dinR/lexA 1917360..1917977 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  KIL00_RS09685 (KIL00_09685) yneA 1918127..1918444 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  KIL00_RS09690 (KIL00_09690) dinL 1918463..1919116 (+) 654 WP_014479938.1 recombinase family protein -
  KIL00_RS09695 (KIL00_09695) ynzC 1919180..1919413 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  KIL00_RS09700 (KIL00_09700) recP/tkt 1919582..1921585 (+) 2004 WP_014476936.1 transketolase Machinery gene
  KIL00_RS09705 (KIL00_09705) sirA 1921738..1922184 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  KIL00_RS09710 (KIL00_09710) yneF 1922270..1922488 (+) 219 WP_003221221.1 YneF family protein -
  KIL00_RS09715 (KIL00_09715) ynzD 1922562..1922735 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=497791 KIL00_RS09680 WP_003238209.1 1917360..1917977(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=497791 KIL00_RS09680 WP_003238209.1 1917360..1917977(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1