Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KIH30_RS24815 Genome accession   NZ_CP075343
Coordinates   5454658..5455437 (-) Length   259 a.a.
NCBI ID   WP_024885652.1    Uniprot ID   A0ACC6UTW0
Organism   Streptomyces sp. EMB24     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5449658..5460437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH30_RS24805 - 5450534..5451757 (-) 1224 WP_199204907.1 hypothetical protein -
  KIH30_RS24810 - 5452112..5454106 (+) 1995 WP_268220886.1 ATP-dependent DNA helicase -
  KIH30_RS24815 dinR/lexA 5454658..5455437 (-) 780 WP_024885652.1 transcriptional repressor LexA Regulator
  KIH30_RS24820 nrdR 5456025..5456579 (+) 555 WP_268220887.1 transcriptional regulator NrdR -
  KIH30_RS24825 - 5456745..5459639 (+) 2895 WP_199204905.1 vitamin B12-dependent ribonucleotide reductase -
  KIH30_RS24830 - 5459755..5460288 (-) 534 WP_268220888.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27989.72 Da        Isoelectric Point: 7.0666

>NTDB_id=497699 KIH30_RS24815 WP_024885652.1 5454658..5455437(-) (dinR/lexA) [Streptomyces sp. EMB24]
MTTTADSAAITAQDRSQGRIEPVHAMNEATNPEAHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=497699 KIH30_RS24815 WP_024885652.1 5454658..5455437(-) (dinR/lexA) [Streptomyces sp. EMB24]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGGACCGCTCCCAGGGCCGCATCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAATCCCGAAGCGCACAAGCGCTCCCTGCCGGGCCGACCTCCCGGCATCCGGGCGGACAGTTCCGGGCTCA
CCGACCGCCAGCGCCGGGTCATCGAGGTCATCAGGGACTCGGTGCAGCGGCGCGGGTACCCGCCGTCGATGCGGGAGATC
GGCCAGGCGGTCGGGCTCTCCAGCACCTCCTCCGTCGCGCACCAGCTCATGGCGCTGGAGCGCAAGGGTTTCCTGCGCCG
TGACCCACACCGTCCGCGCGCGTACGAGGTGCGGGGGTCCGACCAGGCCGCGTCCGTGCAGCCGACGGACACCGCCGGCA
AGCCCGCCGCGTCCTACGTGCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCGGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTGCCCCGGCAGCTCGTCGGCGACGGTGAGCTGTTCGTGCTGAAGGTCGTGGGTGACTCCATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCGGCGATGCTCG
ACGGCGAGGCGACCGTGAAGCGGTTCAAGCGGGAGGACGGCCATGTGTGGCTGCTCCCGCACAACGCGGCCTACGAGCCG
ATCCCCGGCGACGACGCGACGATCCTCGGCAAGGTGGTGGCCGTCCTCCGCCGCGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375