Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   KIH30_RS21855 Genome accession   NZ_CP075343
Coordinates   4795767..4796741 (+) Length   324 a.a.
NCBI ID   WP_086704379.1    Uniprot ID   A0ABN3X9F2
Organism   Streptomyces sp. EMB24     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 4790767..4801741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH30_RS21835 - 4790916..4792040 (+) 1125 WP_251097852.1 dipeptide ABC transporter ATP-binding protein -
  KIH30_RS21840 - 4792238..4793860 (+) 1623 WP_251097853.1 ABC transporter substrate-binding protein -
  KIH30_RS21845 - 4793867..4794790 (+) 924 WP_086704376.1 ABC transporter permease -
  KIH30_RS21850 - 4794783..4795760 (+) 978 WP_199205209.1 ABC transporter permease -
  KIH30_RS21855 amiE 4795767..4796741 (+) 975 WP_086704379.1 ABC transporter ATP-binding protein Regulator
  KIH30_RS21860 - 4796734..4797774 (+) 1041 WP_102640246.1 dipeptide ABC transporter ATP-binding protein -
  KIH30_RS21865 - 4797913..4800051 (-) 2139 WP_268220692.1 prolyl oligopeptidase family serine peptidase -
  KIH30_RS21870 - 4800230..4800424 (+) 195 WP_048455805.1 hypothetical protein -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 35737.35 Da        Isoelectric Point: 6.7641

>NTDB_id=497685 KIH30_RS21855 WP_086704379.1 4795767..4796741(+) (amiE) [Streptomyces sp. EMB24]
MLLEVRDLHVEFRTRDGVAKAVNGVTYGVDEGETLAVLGESGSGKSVTAQAVMGILDTPPGRITGGEVVFQGRDLLKLKE
EERRRIRGAEMAMIFQDALSALNPVLTVGDQLAEMFTVHRGMSRKDARAKAVELMDRVRIPAARERVRQYPHQFSGGMRQ
RIMIAMAIALEPALIIADEPTTALDVTVQAQVMELLAELQREYRMGLILITHDLGVVADVADRIAVMYAGRIVESAPVHE
IYKAPAHPYTRGLLDSIPRLDHKGRELYAIKGLPPNLTRIPPGCPFHPRCPLARDVCTTDDPPLYEVSGTRGSACHFWRE
CLDG

Nucleotide


Download         Length: 975 bp        

>NTDB_id=497685 KIH30_RS21855 WP_086704379.1 4795767..4796741(+) (amiE) [Streptomyces sp. EMB24]
GTGCTGCTCGAAGTGCGCGACCTGCACGTGGAGTTCCGGACCCGGGACGGTGTGGCGAAGGCGGTCAACGGGGTCACCTA
CGGCGTCGACGAGGGGGAGACCCTGGCCGTGCTGGGCGAGTCCGGCTCCGGCAAGTCGGTGACCGCGCAGGCGGTCATGG
GCATCCTCGACACCCCGCCCGGCCGGATCACCGGCGGGGAGGTGGTCTTCCAGGGCCGGGACCTGCTGAAGCTCAAGGAG
GAGGAGCGCCGGCGGATCCGGGGCGCCGAGATGGCGATGATCTTCCAGGACGCGCTGTCCGCGCTGAACCCGGTGCTCAC
CGTGGGCGACCAGCTCGCCGAGATGTTCACCGTGCACCGGGGCATGTCCCGCAAGGACGCGCGCGCCAAGGCGGTCGAGC
TGATGGACCGGGTGCGCATCCCGGCCGCGCGGGAGCGGGTGCGGCAGTACCCGCACCAGTTCTCCGGCGGCATGCGCCAG
CGCATCATGATCGCGATGGCGATCGCCCTGGAGCCGGCGCTGATCATCGCCGACGAGCCGACCACCGCCCTCGACGTCAC
CGTCCAGGCCCAGGTGATGGAGCTGCTGGCGGAGCTCCAGCGGGAGTACCGGATGGGGCTCATCCTCATCACCCACGACC
TGGGCGTGGTCGCCGACGTCGCCGACCGCATCGCGGTGATGTACGCGGGCCGGATCGTGGAGTCGGCGCCGGTGCACGAG
ATCTACAAGGCCCCCGCGCACCCGTACACCCGGGGCCTGCTGGACTCCATCCCGCGCCTGGACCACAAGGGGCGGGAGCT
GTACGCCATCAAGGGCCTGCCGCCCAACCTCACCCGCATCCCGCCCGGCTGCCCGTTCCACCCGCGCTGCCCGCTGGCCC
GGGACGTGTGCACGACCGACGACCCACCGCTGTACGAGGTCTCCGGCACGCGCGGGAGCGCCTGCCACTTCTGGAGGGAG
TGCCTGGATGGCTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

46.729

99.074

0.463
  amiE Streptococcus thermophilus LMG 18311

46.106

99.074

0.457
  amiE Streptococcus thermophilus LMD-9

46.106

99.074

0.457
  oppD Streptococcus mutans UA159

46.178

96.914

0.448