Detailed information NTG0497263

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H4F95_RS24990
• Genome accession: NZ_CP075061
• Coordinates: 4542913..4543896 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain TCM_B_2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4537913..4548896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4F95_RS24965 (H4F95_24975)	bcsF	4538074..4538265 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
H4F95_RS24970 (H4F95_24980)	bcsG	4538262..4539941 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
H4F95_RS24975 (H4F95_24985)	ldrD	4540028..4540135 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H4F95_RS24980 (H4F95_24990)	yhjV	4540611..4541882 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
H4F95_RS24985 (H4F95_24995)	dppF	4541912..4542916 (-)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H4F95_RS24990 (H4F95_25000)	amiE	4542913..4543896 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H4F95_RS24995 (H4F95_25005)	dppC	4543907..4544809 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H4F95_RS25000 (H4F95_25010)	dppB	4544819..4545838 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H4F95_RS25005 (H4F95_25015)	dppA	4545989..4547596 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=497263 H4F95_RS24990 WP_001196486.1 4542913..4543896(-) (amiE) [Escherichia coli strain TCM_B_2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=497263 H4F95_RS24990 WP_001196486.1 4542913..4543896(-) (amiE) [Escherichia coli strain TCM_B_2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404