Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | KIL85_RS23985 | Genome accession | NZ_CP075006 |
| Coordinates | 4604037..4605029 (-) | Length | 330 a.a. |
| NCBI ID | WP_000081550.1 | Uniprot ID | A0A370V765 |
| Organism | Escherichia coli strain 6629 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4599037..4610029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIL85_RS23960 (KIL85_23620) | ygbN | 4599692..4601056 (+) | 1365 | WP_000104439.1 | GntP family transporter | - |
| KIL85_RS23965 (KIL85_23625) | - | 4601095..4601331 (-) | 237 | WP_000562988.1 | non-oxidative hydroxyarylic acid decarboxylases subunit D | - |
| KIL85_RS23970 (KIL85_23630) | - | 4601342..4602769 (-) | 1428 | WP_000863195.1 | non-oxidative hydroxyarylic acid decarboxylases subunit C | - |
| KIL85_RS23975 (KIL85_23635) | - | 4602769..4603362 (-) | 594 | WP_000767718.1 | non-oxidative hydroxyarylic acid decarboxylases subunit B | - |
| KIL85_RS23980 (KIL85_23640) | - | 4603509..4603916 (+) | 408 | WP_001208070.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| KIL85_RS23985 (KIL85_23645) | rpoS | 4604037..4605029 (-) | 993 | WP_000081550.1 | RNA polymerase sigma factor RpoS | Regulator |
| KIL85_RS23990 (KIL85_23650) | nlpD | 4605092..4606186 (-) | 1095 | WP_224692580.1 | murein hydrolase activator NlpD | - |
| KIL85_RS23995 (KIL85_23655) | pcm | 4606371..4606997 (-) | 627 | WP_000254708.1 | protein-L-isoaspartate O-methyltransferase | - |
| KIL85_RS24000 (KIL85_23660) | surE | 4606991..4607752 (-) | 762 | WP_001295182.1 | 5'/3'-nucleotidase SurE | - |
| KIL85_RS24005 (KIL85_23665) | truD | 4607733..4608782 (-) | 1050 | WP_000568946.1 | tRNA pseudouridine(13) synthase TruD | - |
| KIL85_RS24010 (KIL85_23670) | ispF | 4608779..4609258 (-) | 480 | WP_001219242.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| KIL85_RS24015 (KIL85_23675) | ispD | 4609258..4609968 (-) | 711 | WP_000246138.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 330 a.a. Molecular weight: 37972.84 Da Isoelectric Point: 4.5597
>NTDB_id=497166 KIL85_RS23985 WP_000081550.1 4604037..4605029(-) (rpoS) [Escherichia coli strain 6629]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE
Nucleotide
Download Length: 993 bp
>NTDB_id=497166 KIL85_RS23985 WP_000081550.1 4604037..4605029(-) (rpoS) [Escherichia coli strain 6629]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGAT
GAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGAT
GAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
73.065 |
97.879 |
0.715 |