Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IM733_RS17175 Genome accession   NZ_CP063832
Coordinates   3884219..3884620 (-) Length   133 a.a.
NCBI ID   WP_248917738.1    Uniprot ID   -
Organism   Pseudomonas entomophila strain 23S     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3879219..3889620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM733_RS17160 - 3881167..3883191 (-) 2025 WP_248921191.1 methyl-accepting chemotaxis protein -
  IM733_RS17165 - 3883255..3883809 (-) 555 WP_248917736.1 chemotaxis protein CheW -
  IM733_RS17170 pilH 3883806..3884171 (-) 366 WP_248917737.1 twitching motility response regulator PilH -
  IM733_RS17175 pilG 3884219..3884620 (-) 402 WP_248917738.1 twitching motility response regulator PilG Regulator
  IM733_RS17180 gshB 3884867..3885820 (+) 954 WP_248917739.1 glutathione synthase -
  IM733_RS17185 - 3885912..3886811 (+) 900 WP_248917740.1 energy transducer TonB -
  IM733_RS17190 - 3886934..3887503 (+) 570 WP_248917741.1 YqgE/AlgH family protein -
  IM733_RS17195 ruvX 3887503..3887928 (+) 426 WP_023378332.1 Holliday junction resolvase RuvX -
  IM733_RS17200 pyrR 3887980..3888498 (+) 519 WP_248917742.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IM733_RS17205 - 3888511..3889515 (+) 1005 WP_248917743.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14836.16 Da        Isoelectric Point: 6.2307

>NTDB_id=496991 IM733_RS17175 WP_248917738.1 3884219..3884620(-) (pilG) [Pseudomonas entomophila strain 23S]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIIDHKPRIIFVDVLMPRLDGYQTCAVIKHNSEFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPDFAVRDQPAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=496991 IM733_RS17175 WP_248917738.1 3884219..3884620(-) (pilG) [Pseudomonas entomophila strain 23S]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCCCGCACGATTCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGTTTCGACGCCCTGGCGAAGATCATCGATCACAAGCCGCGGATCATCTTCG
TCGACGTGCTCATGCCGCGCCTGGATGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGCGAATTCAAGGACACCCCG
GTGATCCTGCTCTCATCCCGCGATGGCCTGTTCGACAAGGCCCGTGGCCGGGTGGTCGGTTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCATGTGCCCGATTTCGCCGTGCGAGACCAACCCGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632