Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   IRE31_RS00020 Genome accession   NZ_CP063829
Coordinates   2141..2899 (+) Length   252 a.a.
NCBI ID   WP_000410376.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 19A-ST320_99-176     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..7899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRE31_RS00010 (IRE31_00010) rlmH 240..719 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IRE31_RS00015 (IRE31_00015) htrA 902..2083 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  IRE31_RS00020 (IRE31_00020) spo0J 2141..2899 (+) 759 WP_000410376.1 ParB/RepB/Spo0J family partition protein Regulator
  IRE31_RS00025 (IRE31_00025) dnaA 3112..4473 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  IRE31_RS00030 (IRE31_00030) dnaN 4632..5768 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  IRE31_RS00035 (IRE31_00035) - 5833..6027 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  IRE31_RS00040 (IRE31_00040) - 6478..6897 (-) 420 WP_000187319.1 DUF1492 domain-containing protein -
  IRE31_RS00045 (IRE31_00045) - 7516..7767 (-) 252 WP_000644292.1 hypothetical protein -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29130.48 Da        Isoelectric Point: 8.0022

>NTDB_id=496882 IRE31_RS00020 WP_000410376.1 2141..2899(+) (spo0J) [Streptococcus pneumoniae strain 19A-ST320_99-176]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEACAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=496882 IRE31_RS00020 WP_000410376.1 2141..2899(+) (spo0J) [Streptococcus pneumoniae strain 19A-ST320_99-176]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCATG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504