Detailed information NTG0496794

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: HGR01_RS07375
• Genome accession: NZ_CP063785
• Coordinates: 1819743..1821332 (-)
• Length: 529 a.a.
• NCBI ID: WP_228045281.1
• Uniprot ID: -
• Organism: Tolypothrix sp. PCC 7712
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1814743..1826332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGR01_RS07355 (HGR01_07115)	-	1814965..1816158 (-)	1194	WP_045869104.1	NAD(P)/FAD-dependent oxidoreductase	-
HGR01_RS07360 (HGR01_07120)	-	1816345..1818045 (+)	1701	WP_045869103.1	ATP-binding protein	-
HGR01_RS07365 (HGR01_07125)	-	1818669..1819079 (+)	411	WP_045869102.1	response regulator	-
HGR01_RS07370 (HGR01_07130)	-	1819123..1819368 (-)	246	WP_045869101.1	ChaB family protein	-
HGR01_RS07375 (HGR01_07135)	comA	1819743..1821332 (-)	1590	WP_228045281.1	DUF655 domain-containing protein	Machinery gene
HGR01_RS07380 (HGR01_07140)	-	1821517..1822821 (+)	1305	WP_081583941.1	amino acid permease	-
HGR01_RS07385 (HGR01_07145)	-	1822881..1823936 (-)	1056	WP_052335118.1	ATP-binding protein	-
HGR01_RS07390 (HGR01_07150)	-	1824128..1825150 (+)	1023	WP_081583864.1	transposase	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 59082.00 Da
• Isoelectric Point: 6.5979

>NTDB_id=496794 HGR01_RS07375 WP_228045281.1 1819743..1821332(-) (comA) [Tolypothrix sp. PCC 7712]
MLILALAGCQKVQSFNKLPAPLPQDPLVQVYFNHSESSEFTEPYRQQVRLGDNLEQHIVDAIAQSKSTVDVAVQELRLPK
VAQALVDRQKAGVKVRLILENTYSRPWSSFTSEEISQLEKREQERYNEVRKFIDINQDNQLSSEEINQRDALVIVQNAKV
PLIDDKADGTAGSSLMHHKFVIVDNSIVIVTSANFTLSDVFGDYSNPSSLGNANNFLKIESPELAALFTEEFNTMWGDGP
GGKPDSRFGLQKPARSPKTITLGETKITVQFSPTSPTQPWSQSTNGLIANTLESATKYVDMALFVFSDQQLANVLENRHQ
NKVNIRALIEPQFAYRSYSEGLDMMGFALAEECKYEVDNRPWKNPITTVGVPTLPKGDLLHHKFAVIDGNTVITGSHNWS
EAANNGNDETLLVIENPKVAAHYVREFARLYTKVKLGLPLTIQQKIATEAKQCPQIKSPTSSTNQISPKINLNTASLEEL
ETLPGVGKKLAQRIIIARQQQKFTSLNDLEKVPGVSTKMINKWQYTITW

Nucleotide

• Length: 1590 bp

>NTDB_id=496794 HGR01_RS07375 WP_228045281.1 1819743..1821332(-) (comA) [Tolypothrix sp. PCC 7712]
TTGCTTATTCTTGCTCTAGCTGGTTGTCAAAAAGTTCAGTCATTCAATAAGCTTCCTGCACCCTTACCGCAAGATCCATT
GGTGCAGGTTTACTTTAACCATTCCGAGTCCTCAGAATTTACCGAACCTTACCGTCAGCAAGTTCGTCTGGGAGATAATT
TAGAACAGCATATTGTCGATGCAATTGCTCAATCTAAATCTACCGTCGATGTCGCCGTTCAAGAATTACGTTTACCAAAA
GTAGCTCAAGCATTAGTAGATAGACAAAAAGCTGGAGTCAAAGTCAGATTAATTTTAGAAAATACCTATAGCCGTCCTTG
GAGTAGCTTCACAAGCGAGGAAATTAGCCAGTTAGAAAAAAGGGAACAAGAACGCTATAACGAAGTTCGTAAATTTATCG
ATATTAACCAGGATAATCAGCTCAGTTCTGAAGAAATTAACCAAAGAGATGCTTTGGTAATCGTACAAAATGCCAAAGTT
CCTTTAATAGATGACAAAGCCGATGGGACAGCAGGTAGCAGTTTAATGCATCACAAATTTGTGATTGTAGACAATAGCAT
TGTGATTGTTACTTCTGCAAACTTCACTTTGAGCGATGTTTTTGGAGACTATAGTAATCCCAGTAGTTTAGGCAATGCCA
ACAATTTCTTAAAAATAGAGAGTCCAGAACTAGCAGCTTTATTTACAGAAGAGTTTAACACCATGTGGGGTGATGGCCCA
GGCGGTAAGCCAGATAGCCGATTTGGTTTGCAAAAACCAGCGCGATCGCCAAAAACTATTACTTTAGGTGAAACTAAAAT
TACTGTACAGTTTTCGCCAACTTCACCCACTCAACCTTGGAGTCAGAGTACAAACGGTTTAATAGCTAATACTTTAGAAT
CAGCTACTAAATATGTGGATATGGCATTGTTTGTATTTTCCGATCAACAATTAGCTAATGTTCTCGAAAATCGCCATCAA
AACAAAGTCAATATTCGCGCTTTAATTGAACCACAATTTGCCTATCGTTCTTACAGCGAAGGCTTAGATATGATGGGATT
TGCACTAGCTGAAGAGTGTAAATATGAAGTAGATAACCGCCCTTGGAAAAATCCTATTACTACTGTTGGCGTACCAACTT
TACCAAAAGGCGATTTATTGCATCACAAATTTGCTGTTATTGATGGTAATACAGTAATTACAGGTTCTCATAATTGGTCA
GAAGCCGCTAATAATGGTAACGATGAAACCCTACTAGTAATTGAAAATCCTAAAGTTGCTGCCCATTATGTACGTGAATT
TGCTCGTCTTTATACAAAGGTAAAACTTGGTTTACCACTTACTATTCAACAAAAAATTGCAACCGAAGCCAAACAATGTC
CGCAAATTAAATCTCCAACATCCAGTACAAATCAGATATCTCCTAAAATCAATCTCAATACCGCTAGCCTAGAAGAATTA
GAAACCCTACCAGGTGTTGGTAAAAAATTAGCACAGCGAATAATCATTGCTCGTCAACAGCAAAAGTTTACATCTTTGAA
TGATTTAGAAAAAGTCCCGGGTGTTAGTACCAAAATGATAAATAAATGGCAATATACTATTACTTGGTAG

Domains

Predicted by InterproScan.

• PLD-like domain (PLDc_2) (58-236)

• PLD-like domain (PLDc_2) (289-430)

• Helix-hairpin-helix motif (HHH_3) (468-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	48.423	100	0.493