Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IH404_RS26710 Genome accession   NZ_CP063780
Coordinates   6098339..6098746 (-) Length   135 a.a.
NCBI ID   WP_005792254.1    Uniprot ID   A0A7S7MTU1
Organism   Pseudomonas sp. OST1909     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6093339..6103746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IH404_RS26695 (IH404_26695) - 6095342..6097393 (-) 2052 WP_005792250.1 methyl-accepting chemotaxis protein -
  IH404_RS26700 (IH404_26700) - 6097390..6097914 (-) 525 WP_032878938.1 chemotaxis protein CheW -
  IH404_RS26705 (IH404_26705) pilH 6097927..6098292 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  IH404_RS26710 (IH404_26710) pilG 6098339..6098746 (-) 408 WP_005792254.1 twitching motility response regulator PilG Regulator
  IH404_RS26715 (IH404_26715) gshB 6098986..6099939 (+) 954 WP_122735897.1 glutathione synthase -
  IH404_RS26720 (IH404_26720) - 6100017..6100922 (+) 906 WP_122735896.1 energy transducer TonB -
  IH404_RS26725 (IH404_26725) - 6101074..6101643 (+) 570 WP_122735895.1 YqgE/AlgH family protein -
  IH404_RS26730 (IH404_26730) ruvX 6101643..6102080 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  IH404_RS26735 (IH404_26735) pyrR 6102213..6102719 (+) 507 WP_194439480.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.53 Da        Isoelectric Point: 7.3845

>NTDB_id=496786 IH404_RS26710 WP_005792254.1 6098339..6098746(-) (pilG) [Pseudomonas sp. OST1909]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=496786 IH404_RS26710 WP_005792254.1 6098339..6098746(-) (pilG) [Pseudomonas sp. OST1909]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACACTGTT
GAAGAACATGGGGTGCGAGGTCATCACCGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTGATCATGTTGTCCTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S7MTU1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652