Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   INQ40_RS10555 Genome accession   NZ_CP063772
Coordinates   2306978..2307376 (-) Length   132 a.a.
NCBI ID   WP_043957694.1    Uniprot ID   -
Organism   Lysobacter sp. H21R4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2301978..2312376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ40_RS10540 (INQ40_10540) - 2303951..2305972 (-) 2022 WP_194340389.1 methyl-accepting chemotaxis protein -
  INQ40_RS10545 (INQ40_10545) - 2306040..2306597 (-) 558 Protein_2055 chemotaxis protein CheW -
  INQ40_RS10550 (INQ40_10550) - 2306594..2306959 (-) 366 WP_194340390.1 response regulator -
  INQ40_RS10555 (INQ40_10555) pilG 2306978..2307376 (-) 399 WP_043957694.1 twitching motility response regulator PilG Regulator
  INQ40_RS10560 (INQ40_10560) gshB 2307571..2308524 (+) 954 WP_194340391.1 glutathione synthase -
  INQ40_RS10565 (INQ40_10565) - 2308521..2309396 (+) 876 WP_194340392.1 energy transducer TonB -
  INQ40_RS10570 (INQ40_10570) tsaB 2309406..2310161 (-) 756 WP_194340393.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  INQ40_RS10575 (INQ40_10575) - 2310158..2312281 (-) 2124 WP_194340394.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14769.09 Da        Isoelectric Point: 7.8566

>NTDB_id=496704 INQ40_RS10555 WP_043957694.1 2306978..2307376(-) (pilG) [Lysobacter sp. H21R4]
MQDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQKPQIIFVDIMMPRLDGYQTCALIKN
NQVFKHTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRGELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=496704 INQ40_RS10555 WP_043957694.1 2306978..2307376(-) (pilG) [Lysobacter sp. H21R4]
ATGCAAGACGAGGTCCGCAGCGGCAGCCTCGATGGGCTGCGAGTCATGGTGATCGACGACTCAAAGACCATCCGCCGCAC
CGCTGAAACATTGCTCAAGCGCGAAGGCTGCGAAGTAGTGACCGCCACCGATGGGTTCGAGGCACTGGCCAAGATCGCCG
ACCAGAAGCCGCAGATCATCTTTGTCGACATCATGATGCCGCGCCTTGATGGTTATCAGACCTGCGCATTGATCAAGAAC
AACCAGGTTTTCAAGCACACACCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCCGCGGCCGCATCGT
CGGCTCCGAGCAGTACCTGACCAAACCATTCACGCGCGGGGAACTCCTCGACGCCATACGAACACACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697