Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   IOD65_RS17810 Genome accession   NZ_CP063769
Coordinates   3730775..3733003 (+) Length   742 a.a.
NCBI ID   WP_005065939.1    Uniprot ID   A0A022J0X3
Organism   Acinetobacter sp. Ac-14     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3725775..3738003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IOD65_RS17785 (IOD65_17785) lnt 3726157..3727716 (+) 1560 WP_005065947.1 apolipoprotein N-acyltransferase -
  IOD65_RS17790 (IOD65_17790) - 3727718..3728056 (-) 339 WP_005065945.1 tRNA-binding protein -
  IOD65_RS17795 (IOD65_17795) - 3728202..3728546 (-) 345 WP_002114661.1 hypothetical protein -
  IOD65_RS17800 (IOD65_17800) gspG 3728813..3729397 (-) 585 WP_005065943.1 type II secretion system major pseudopilin GspG -
  IOD65_RS17805 (IOD65_17805) gspF 3729421..3730626 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  IOD65_RS17810 (IOD65_17810) priA 3730775..3733003 (+) 2229 WP_005065939.1 primosomal protein N' Machinery gene
  IOD65_RS17815 (IOD65_17815) - 3733080..3734924 (+) 1845 WP_005065938.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  IOD65_RS17820 (IOD65_17820) - 3735088..3735963 (+) 876 WP_005065936.1 Hsp33 family molecular chaperone HslO -
  IOD65_RS17825 (IOD65_17825) - 3736101..3736712 (+) 612 WP_005065933.1 LysE family translocator -
  IOD65_RS17830 (IOD65_17830) - 3736859..3737815 (+) 957 WP_005065930.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83977.76 Da        Isoelectric Point: 8.5606

>NTDB_id=496678 IOD65_RS17810 WP_005065939.1 3730775..3733003(+) (priA) [Acinetobacter sp. Ac-14]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQVAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=496678 IOD65_RS17810 WP_005065939.1 3730775..3733003(+) (priA) [Acinetobacter sp. Ac-14]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAATCTGA
TTGGCATCATTACTGAAAAAGTTGACCCAAGTGAATCGTTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCTGCATTATTGCGTCAAGGCAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATCACGC
CATGTGATAATGTTGAAGCGCTTCTTAAACGTTCTGTTAAGCAACAAGACGCATATCAAATTTTAAAGTTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACATGACTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACCCTAAATGAAGACCAAA
AGAAAGCAACTCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAGGTGTTAAAGCAAGGGAAACAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGCTTTAAGTCGCGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACGCGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATCTTAGATGAAGAACATGATCTCTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCTCTTTATCGAGGTCACTTACAAAGCTGCCCTGTTATTTTAGGTTCAGCAACTCCAAGCATAGATAGTT
ATTATTTAGTCGAAACTGGCAAATTAACTGCACTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGATATGCACCTGTACTGGTGTGTGAAAGCTGTGGCTGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTACCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCTTAGGTGCTGGAACGGCTAAGGTCGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGATCGTGACAGTACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCTAAAGGCCATCATTTCCCA
CATGTAACTTTGGTTGCTATTCTAGATATTGATGCTGGGTTACTTAGTGTTGATATTCGCGCACCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGCCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCTTAAGACCTGACC
ATCCATTACTCACCACACTCATCGAAAAAGATTATCGAGCGGTTGCTAAACAGACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTACCGTTATGCAGTACTGATACGTGCAGAATCCAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
TGCTGAGCAACTTCGTCAAGTGGCAGGTGACATTGTTGATATTTGGGGGCCAATTCCAGCCCCTATGGAGCGTAAAGCTG
GACGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTCCATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCACCAAGGCAGCATCAACTTAGGCTATCAATTGATGTTGATCCTCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A022J0X3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.113

100

0.981