Detailed information NTG0496665

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IOD65_RS11020
• Genome accession: NZ_CP063769
• Coordinates: 2319997..2320752 (-)
• Length: 251 a.a.
• NCBI ID: WP_005069530.1
• Uniprot ID: -
• Organism: Acinetobacter sp. Ac-14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2314997..2325752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IOD65_RS10990 (IOD65_10990)	-	2315304..2315744 (-)	441	WP_005069523.1	SRPBCC family protein	-
IOD65_RS10995 (IOD65_10995)	tadA	2315815..2316318 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
IOD65_RS11000 (IOD65_11000)	-	2316324..2317448 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
IOD65_RS11005 (IOD65_11005)	ung	2317445..2318158 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
IOD65_RS11010 (IOD65_11010)	-	2318212..2318808 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
IOD65_RS11015 (IOD65_11015)	gspK	2319037..2319996 (-)	960	WP_005069529.1	type II secretion system minor pseudopilin GspK	-
IOD65_RS11020 (IOD65_11020)	xcpW	2319997..2320752 (-)	756	WP_005069530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IOD65_RS11025 (IOD65_11025)	xcpV	2320752..2321132 (-)	381	WP_005069533.1	type II secretion system minor pseudopilin GspI	Machinery gene
IOD65_RS11030 (IOD65_11030)	-	2321122..2321676 (-)	555	WP_005069534.1	type II secretion system protein	-
IOD65_RS11035 (IOD65_11035)	-	2321683..2322291 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
IOD65_RS11040 (IOD65_11040)	-	2322328..2323101 (-)	774	WP_005069538.1	TatD family hydrolase	-
IOD65_RS11045 (IOD65_11045)	-	2323119..2323460 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
IOD65_RS11050 (IOD65_11050)	-	2323471..2324451 (-)	981	WP_005069541.1	DNA polymerase III, delta' subunit	-
IOD65_RS11055 (IOD65_11055)	kdsB	2324465..2325226 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28682.93 Da
• Isoelectric Point: 9.5669

>NTDB_id=496665 IOD65_RS11020 WP_005069530.1 2319997..2320752(-) (xcpW) [Acinetobacter sp. Ac-14]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=496665 IOD65_RS11020 WP_005069530.1 2319997..2320752(-) (xcpW) [Acinetobacter sp. Ac-14]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80.4	99.602	0.801