Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   IOD65_RS03345 Genome accession   NZ_CP063769
Coordinates   685070..685954 (+) Length   294 a.a.
NCBI ID   WP_005067319.1    Uniprot ID   A0A022J0V5
Organism   Acinetobacter sp. Ac-14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 680070..690954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IOD65_RS03320 (IOD65_03320) - 680383..681630 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  IOD65_RS03325 (IOD65_03325) wrbA 681992..682594 (+) 603 WP_005067313.1 NAD(P)H:quinone oxidoreductase -
  IOD65_RS03330 (IOD65_03330) - 682646..683221 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  IOD65_RS03335 (IOD65_03335) - 683294..684007 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  IOD65_RS03340 (IOD65_03340) - 684166..684837 (-) 672 WP_002119526.1 hypothetical protein -
  IOD65_RS03345 (IOD65_03345) tonB2 685070..685954 (+) 885 WP_005067319.1 energy transducer TonB Machinery gene
  IOD65_RS03350 (IOD65_03350) ybeY 686006..686482 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  IOD65_RS03355 (IOD65_03355) - 686492..687580 (-) 1089 WP_002119513.1 PhoH family protein -
  IOD65_RS03360 (IOD65_03360) miaB 687618..689069 (-) 1452 WP_005067325.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33639.16 Da        Isoelectric Point: 7.2036

>NTDB_id=496659 IOD65_RS03345 WP_005067319.1 685070..685954(+) (tonB2) [Acinetobacter sp. Ac-14]
MLNKRSLSIEPFHYWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=496659 IOD65_RS03345 WP_005067319.1 685070..685954(+) (tonB2) [Acinetobacter sp. Ac-14]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATTATTGGTGGCAAGACCGAGTCTTTATTGCCGCAACAATATT
AGCAATCTTACTCCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCATCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCAGCAGCAAAGAGAACTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAGATAAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCGGCTGCTTATTTGGATAAGTTCCGTGAAAAAGTAGAGCTTTATGGCAACCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A022J0V5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

89.796

100

0.898