Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IM712_RS16770 Genome accession   NZ_CP063768
Coordinates   3471996..3472460 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain KMU01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3466996..3477460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM712_RS16745 - 3467506..3468054 (-) 549 WP_077722140.1 hypothetical protein -
  IM712_RS16750 fadH 3468165..3468929 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  IM712_RS16755 - 3469073..3469936 (+) 864 WP_077722139.1 metallophosphoesterase -
  IM712_RS16760 - 3470011..3470505 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  IM712_RS16765 - 3470581..3471873 (+) 1293 WP_077722138.1 MFS transporter -
  IM712_RS16770 kre 3471996..3472460 (+) 465 WP_003154622.1 YkyB family protein Regulator
  IM712_RS16775 cheV 3472503..3473414 (-) 912 WP_007409609.1 chemotaxis protein CheV -
  IM712_RS16780 - 3473603..3473764 (+) 162 WP_164672396.1 hypothetical protein -
  IM712_RS16785 - 3473965..3475184 (+) 1220 Protein_3275 aminotransferase A -
  IM712_RS16790 - 3475160..3476980 (-) 1821 WP_003154628.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=496626 IM712_RS16770 WP_003154622.1 3471996..3472460(+) (kre) [Bacillus velezensis strain KMU01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=496626 IM712_RS16770 WP_003154622.1 3471996..3472460(+) (kre) [Bacillus velezensis strain KMU01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929