Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   IM712_RS16670 Genome accession   NZ_CP063768
Coordinates   3455999..3456595 (-) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain KMU01     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3450999..3461595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM712_RS16645 mobB 3451375..3451896 (-) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  IM712_RS16650 glp 3451857..3453149 (-) 1293 WP_077722146.1 gephyrin-like molybdotransferase Glp -
  IM712_RS16655 - 3453167..3454186 (-) 1020 WP_077722145.1 molybdopterin-synthase adenylyltransferase MoeB -
  IM712_RS16660 - 3454238..3454840 (-) 603 WP_077722144.1 molybdenum cofactor guanylyltransferase -
  IM712_RS16665 - 3454986..3455978 (+) 993 WP_069473386.1 sporulation protein -
  IM712_RS16670 rok 3455999..3456595 (-) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  IM712_RS16675 - 3457047..3457505 (-) 459 WP_077722142.1 redoxin domain-containing protein -
  IM712_RS16680 - 3457793..3458599 (+) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  IM712_RS16685 - 3458633..3458878 (-) 246 WP_003154596.1 YkuS family protein -
  IM712_RS16690 - 3458939..3460063 (-) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  IM712_RS16695 dapD 3460134..3460844 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  IM712_RS16700 - 3460926..3461381 (-) 456 WP_077722141.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=496625 IM712_RS16670 WP_070081746.1 3455999..3456595(-) (rok) [Bacillus velezensis strain KMU01]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=496625 IM712_RS16670 WP_070081746.1 3455999..3456595(-) (rok) [Bacillus velezensis strain KMU01]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859