Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | SSU12_RS00420 | Genome accession | NC_017619 |
| Coordinates | 71537..71803 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis SS12 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66537..76803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSU12_RS00385 (SSU12_0061) | cinA | 66543..67724 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| SSU12_RS00390 (SSU12_0062) | recA | 67776..68927 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| SSU12_RS00395 (SSU12_0063) | spx | 69163..69561 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| SSU12_RS00400 (SSU12_0064) | - | 69661..69927 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| SSU12_RS00405 (SSU12_0065) | ruvX | 69927..70346 (+) | 420 | WP_079254804.1 | Holliday junction resolvase RuvX | - |
| SSU12_RS00410 (SSU12_0066) | - | 70358..70678 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| SSU12_RS00415 (SSU12_0067) | - | 70886..71464 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| SSU12_RS00420 (SSU12_0068) | comX/sigX | 71537..71803 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| SSU12_RS00425 (SSU12_0070) | rpsJ | 72127..72435 (+) | 309 | WP_011922546.1 | 30S ribosomal protein S10 | - |
| SSU12_RS00430 (SSU12_0071) | rplC | 72532..73158 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| SSU12_RS00435 (SSU12_0072) | rplD | 73183..73806 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| SSU12_RS00440 (SSU12_0073) | - | 73806..74105 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| SSU12_RS00445 (SSU12_0074) | rplB | 74123..74956 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| SSU12_RS00450 (SSU12_0075) | rpsS | 75207..75488 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| SSU12_RS00455 (SSU12_0076) | rplV | 75506..75850 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| SSU12_RS00460 (SSU12_0077) | rpsC | 75863..76516 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=49662 SSU12_RS00420 WP_014635810.1 71537..71803(+) (comX/sigX) [Streptococcus suis SS12]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=49662 SSU12_RS00420 WP_014635810.1 71537..71803(+) (comX/sigX) [Streptococcus suis SS12]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |