Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BACVE_RS06380 Genome accession   NZ_CP063687
Coordinates   1264688..1265641 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain NST6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1259688..1270641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACVE_RS06360 (BACVE_001290) - 1260567..1261991 (+) 1425 WP_063636989.1 MDR family MFS transporter -
  BACVE_RS06365 (BACVE_001291) - 1262033..1262977 (-) 945 WP_063636990.1 siderophore ABC transporter substrate-binding protein -
  BACVE_RS06370 (BACVE_001292) - 1262999..1263757 (-) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  BACVE_RS06375 (BACVE_001293) - 1263751..1264698 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  BACVE_RS06380 (BACVE_001294) ceuB 1264688..1265641 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  BACVE_RS06385 (BACVE_001295) - 1266055..1267419 (+) 1365 WP_025649998.1 aspartate kinase -
  BACVE_RS06390 - 1267514..1267609 (+) 96 WP_021495118.1 YjcZ family sporulation protein -
  BACVE_RS06395 (BACVE_001296) phrC 1267760..1267879 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  BACVE_RS06400 (BACVE_001297) rapC 1267863..1269011 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  BACVE_RS06405 (BACVE_001298) - 1269170..1270597 (-) 1428 WP_088056326.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=496265 BACVE_RS06380 WP_015239156.1 1264688..1265641(-) (ceuB) [Bacillus velezensis strain NST6]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=496265 BACVE_RS06380 WP_015239156.1 1264688..1265641(-) (ceuB) [Bacillus velezensis strain NST6]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTTCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCTCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536