Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BACVE_RS01055 Genome accession   NZ_CP063687
Coordinates   249385..249849 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain NST6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 244385..254849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACVE_RS01030 (BACVE_000203) - 244892..245440 (-) 549 WP_017417677.1 hypothetical protein -
  BACVE_RS01035 (BACVE_000204) fadH 245554..246318 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BACVE_RS01040 (BACVE_000205) - 246462..247325 (+) 864 WP_022553417.1 metallophosphoesterase -
  BACVE_RS01045 (BACVE_000206) - 247400..247894 (+) 495 WP_088056573.1 L,D-transpeptidase family protein -
  BACVE_RS01050 (BACVE_000207) - 247970..249262 (+) 1293 WP_014417606.1 MFS transporter -
  BACVE_RS01055 (BACVE_000208) kre 249385..249849 (+) 465 WP_003154622.1 YkyB family protein Regulator
  BACVE_RS01060 (BACVE_000209) cheV 249892..250803 (-) 912 WP_025649511.1 chemotaxis protein CheV -
  BACVE_RS01065 (BACVE_000210) - 250992..251153 (+) 162 WP_007409608.1 hypothetical protein -
  BACVE_RS01070 (BACVE_000211) - 251354..252523 (+) 1170 WP_007611083.1 aminotransferase A -
  BACVE_RS01075 (BACVE_000212) - 252549..254369 (-) 1821 WP_063636604.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=496247 BACVE_RS01055 WP_003154622.1 249385..249849(+) (kre) [Bacillus velezensis strain NST6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=496247 BACVE_RS01055 WP_003154622.1 249385..249849(+) (kre) [Bacillus velezensis strain NST6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929