Detailed information NTG0496242

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: IM698_RS22625
• Genome accession: NZ_CP063683
• Coordinates: 1583922..1585016 (+)
• Length: 364 a.a.
• NCBI ID: WP_260811497.1
• Uniprot ID: -
• Organism: Vibrio splendidus strain ED144
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1578922..1590016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM698_RS22595 (IM698_22560)	-	1580477..1580713 (-)	237	WP_048608901.1	hypothetical protein	-
IM698_RS22600 (IM698_22565)	-	1580880..1581506 (-)	627	WP_260811495.1	D-Ala-D-Ala carboxypeptidase family metallohydrolase	-
IM698_RS22605 (IM698_22570)	-	1581875..1582189 (-)	315	WP_086712581.1	DUF496 family protein	-
IM698_RS22610 (IM698_22575)	-	1582385..1582585 (+)	201	WP_248375948.1	hypothetical protein	-
IM698_RS22615 (IM698_22580)	-	1582642..1583298 (+)	657	WP_248375950.1	YceH family protein	-
IM698_RS22620 (IM698_22585)	-	1583299..1583613 (+)	315	WP_260811496.1	GIY-YIG nuclease family protein	-
IM698_RS22625 (IM698_22590)	luxP	1583922..1585016 (+)	1095	WP_260811497.1	substrate-binding domain-containing protein	Regulator
IM698_RS22630 (IM698_22595)	luxQ	1585016..1587589 (+)	2574	WP_260811498.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
IM698_RS22635 (IM698_22600)	-	1587692..1588351 (-)	660	WP_248375972.1	PilZ domain-containing protein	-
IM698_RS22640 (IM698_22605)	-	1588546..1588896 (+)	351	WP_260811499.1	HopJ type III effector protein	-
IM698_RS22645 (IM698_22610)	-	1589016..1589324 (-)	309	WP_248392942.1	DUF1289 domain-containing protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41327.51 Da
• Isoelectric Point: 4.9258

>NTDB_id=496242 IM698_RS22625 WP_260811497.1 1583922..1585016(+) (luxP) [Vibrio splendidus strain ED144]
MKRLLLLFGLAVFSASALSHGTHVLNGYWEYQDYLSTFPEQKALTDKMVEAVQNHPVPLRRMQDEPITISVVYPGQQISD
YWVRNIQAFEKRLDRLKIRYQINQVFTRINADLTQQSISLQEAIENKTDYLIFTLDTTRHRKFIEHVLTSTDTKLILQNI
TTPVRAWADRQPLMYVGFDHATGSLKLADYFKQVSQPDSKYSVLYYSQGYISDARGDTFIHEVNTDTNFTLKSSFYTKSN
KDSGYQAAKISIENDQDLDFIYACSTDVALGAVEAIRESGQDILVNGWGGGSAELEAIARGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEIVTKEDSPERISELKQRAFRYSGQ

Nucleotide

• Length: 1095 bp

>NTDB_id=496242 IM698_RS22625 WP_260811497.1 1583922..1585016(+) (luxP) [Vibrio splendidus strain ED144]
ATGAAACGTTTACTGTTGTTGTTTGGGCTTGCCGTATTTTCTGCGTCCGCTCTATCCCATGGTACTCATGTCCTGAATGG
GTACTGGGAATACCAAGATTATCTTTCCACTTTTCCAGAACAAAAAGCATTGACCGATAAAATGGTCGAGGCTGTACAAA
ATCACCCTGTGCCATTAAGAAGAATGCAAGATGAGCCGATCACGATTTCCGTGGTGTATCCGGGTCAACAGATCTCGGAT
TACTGGGTTCGTAATATTCAAGCTTTTGAGAAGCGTCTCGATAGGCTGAAAATTCGCTATCAAATAAATCAAGTATTTAC
CCGCATTAATGCCGACCTCACGCAGCAGAGTATTTCACTGCAAGAAGCCATTGAGAACAAGACGGATTACTTGATTTTCA
CGCTAGACACCACGCGCCACCGCAAGTTTATTGAGCATGTGTTGACCTCTACAGACACCAAACTGATTCTTCAAAACATC
ACAACGCCAGTTCGTGCCTGGGCGGATAGACAGCCACTTATGTATGTGGGTTTTGATCATGCGACAGGCAGCTTAAAACT
GGCGGACTATTTTAAACAAGTAAGCCAACCAGACAGTAAGTATTCTGTTTTATATTACTCACAAGGTTATATCAGTGATG
CGCGTGGAGATACTTTTATTCATGAAGTGAATACGGATACGAACTTTACCCTTAAGTCTTCGTTTTACACAAAATCAAAC
AAAGACAGTGGTTACCAAGCGGCTAAAATCAGCATAGAGAACGATCAGGATCTAGACTTTATCTATGCATGCTCAACGGA
TGTCGCTCTTGGTGCGGTGGAAGCTATTCGTGAATCGGGTCAAGATATCTTAGTGAATGGTTGGGGCGGTGGCTCTGCTG
AACTTGAAGCCATAGCAAGGGGCGACCTAGATGTTACTGTCATGCGCATGAACGATGATACGGGCATTGCGATGGCAGAG
GCGATCAAGTGGGATCTAGCCGGTTTGGAAGTGCCTACCGTTTACTCTGGTGAATTTGAAATTGTGACCAAGGAAGATTC
CCCAGAACGTATTTCAGAACTTAAACAGCGAGCATTTAGGTACTCAGGTCAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-322)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	62.568	100	0.629