Detailed information NTG0496193

Bioinformatically predicted

Overview

• Name: pilL-C
• Type: Machinery gene
• Locus tag: IQE94_RS12360
• Genome accession: NZ_CP063659
• Coordinates: 2601731..2605021 (+)
• Length: 1096 a.a.
• NCBI ID: WP_223342050.1
• Uniprot ID: -
• Organism: Synechocystis sp. PCC 7339
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2596731..2610021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IQE94_RS12340 (IQE94_12215)	-	2597007..2597473 (-)	467	Protein_2455	DUF1830 domain-containing protein	-
IQE94_RS12345 (IQE94_12220)	-	2597650..2599245 (+)	1596	WP_223342049.1	photosystem II high light acclimation radical SAM protein	-
IQE94_RS12350 (IQE94_12225)	-	2599286..2600323 (-)	1038	WP_370630475.1	RNA polymerase sigma factor, RpoD/SigA family	-
IQE94_RS12355 (IQE94_12230)	era	2600783..2601721 (+)	939	WP_190596878.1	GTPase Era	-
IQE94_RS12360 (IQE94_12235)	pilL-C	2601731..2605021 (+)	3291	WP_223342050.1	hybrid sensor histidine kinase/response regulator	Machinery gene
IQE94_RS12365 (IQE94_12240)	-	2605021..2608134 (+)	3114	WP_223342051.1	alpha-mannosidase	-
IQE94_RS12370 (IQE94_12245)	-	2608127..2609029 (+)	903	WP_223342052.1	ABC transporter permease	-
IQE94_RS12375 (IQE94_12250)	-	2609076..2609561 (+)	486	WP_223342053.1	MEKHLA domain-containing protein	-

Sequence

Protein

• Length: 1096 a.a.
• Molecular weight: 120780.61 Da
• Isoelectric Point: 4.3886

>NTDB_id=496193 IQE94_RS12360 WP_223342050.1 2601731..2605021(+) (pilL-C) [Synechocystis sp. PCC 7339]
MTSDPNPAQAFENWFEEEEGEDAFTSLIGGDEENNGIEELDFGDLFEGEPTVIQEEGFGPSSPGKEEPPVRMTLDFNSPE
AELDALFTDEDAPTTVIDPFESSSWLEIDQMMEADPLASIPETTAPAYQTSGRLNDHDLAELQDLLGVGDAEPAITSPGL
HTFAGADLAPPSTGKVMLFAAIDDLDGLIDAPVLDENFSFTELESLIDTPAQKSFATISHPFRLPVAVEEEDEDEFKDLE
ALLEQADSNLGGGIASMGGARLPARPRQVKSRSFEQTMRVPIKQLDNLSNLIGELVVKRNRLEQDQERLRQFLDNLLNQA
QNLSDVGGRMQDLYERTLLEGALLASRNTSNRYQSSKTTYPDARATASGSSTMNEQPLDALEMDRFTGFHLLSQEMIELI
VRVRESASDIQYLVDETDQVARTLRQVTTQLQEGMTKSRMVPFTQTADRLPRAIREVSMKLNKRVNLEVEGGDVLIDKMI
LEHLYNPMTHLVNNAITHGIETPAQRQQLGKSAEGHLAVRAFLQGNQTLITVSDDGAGINTEMVKQKAVEKGLITRMEAQ
SLSQSEVYDLLFHAGFSTKDTADDFAGRGVGLDVVRTSLIDIRGAINIDSTVGKGTTFTIRLPLTLSICKALCCLSDRAR
IAFPMDGVEDTRDYLPKDIVTDEDGQKCVRYGKEALLLPLYPLKDLLNYNRQLSRGSVYGGKQEDDVVRVIIARGSSGNL
LALQIDQILGEEEIVIKQIEGPIPKPPGIAGATVRGDGSIMPIADVLELIEIAQGRLRTDSSGGLWRKTLTPTANEVHMD
PTVLIVDDSITVRELLSLSFKKAGFRVEQARDGQEAWEQLKSGLPCDLVFCDIEMPRKNGLELLSELQADEELSSIPVAL
LTSRGADRHRKVAAKLGATGYFTKPYTEKDILDAANRMLSGEVLLPGSTRKTNSILSRFKKARGNFSEEAPTIVKSNPGT
LRSTVLIIDDSVMVREMLSMTFKKADYHTETARDGQDAWEKLKSGLPCDLILCDIEMPRMNGLELLERIQEDPNLSRIPV
AMITSRGAQKMQRMAAEKGAKGYFVKPYIEETLLEASQRLIRGEVLLDLAALSAEE

Nucleotide

• Length: 3291 bp

>NTDB_id=496193 IQE94_RS12360 WP_223342050.1 2601731..2605021(+) (pilL-C) [Synechocystis sp. PCC 7339]
ATGACTAGCGATCCCAACCCAGCCCAGGCATTTGAAAATTGGTTTGAGGAAGAGGAGGGGGAAGATGCCTTTACTTCCCT
CATTGGTGGTGACGAAGAAAATAATGGCATTGAGGAATTGGATTTTGGTGATCTGTTTGAAGGAGAACCCACCGTTATCC
AGGAAGAAGGGTTTGGCCCATCGTCCCCAGGGAAGGAAGAGCCACCGGTTCGCATGACCCTAGATTTCAATTCCCCGGAA
GCGGAACTAGACGCTCTCTTTACCGATGAAGATGCCCCCACAACGGTGATCGATCCTTTTGAAAGCTCCAGTTGGCTAGA
AATTGACCAAATGATGGAAGCGGATCCCCTTGCTTCCATTCCCGAAACTACTGCCCCCGCCTATCAAACCAGTGGTAGAC
TCAATGACCATGACCTGGCGGAGTTGCAGGACTTATTAGGGGTAGGGGATGCTGAGCCCGCCATCACCAGCCCTGGTTTG
CATACCTTTGCCGGTGCCGATCTGGCGCCCCCATCGACAGGCAAAGTAATGCTGTTTGCGGCGATCGATGATTTGGATGG
ACTGATTGATGCCCCTGTGCTGGACGAGAATTTTTCCTTCACCGAACTAGAAAGCCTCATCGATACCCCAGCGCAAAAAT
CCTTTGCCACCATCAGCCATCCTTTTCGCTTGCCCGTGGCTGTGGAAGAGGAAGATGAGGACGAATTCAAAGACTTGGAA
GCCTTGCTAGAGCAAGCAGATAGCAATCTTGGGGGAGGCATAGCCAGTATGGGAGGGGCTCGATTGCCCGCCCGGCCCCG
GCAAGTTAAATCCCGTAGTTTTGAGCAGACCATGCGGGTCCCCATTAAACAACTGGATAATCTCAGCAACTTAATTGGAG
AACTAGTAGTCAAACGGAACCGCCTCGAACAGGATCAAGAACGTTTGCGGCAATTTTTGGATAATCTGCTTAACCAGGCC
CAAAACCTCAGCGATGTGGGGGGGCGTATGCAGGACTTATACGAGAGAACTTTGTTGGAGGGAGCTCTATTAGCTAGCCG
CAACACCAGCAACCGTTATCAATCCTCGAAAACGACCTACCCTGATGCCAGGGCCACGGCCTCCGGTTCTTCCACTATGA
ATGAACAGCCCTTGGATGCCTTGGAAATGGACCGTTTTACAGGCTTTCATCTACTTTCCCAGGAGATGATTGAACTGATT
GTACGGGTGCGGGAGTCTGCGTCAGACATTCAGTACTTGGTGGACGAGACTGATCAAGTTGCCAGAACCCTGAGACAGGT
AACCACCCAACTCCAAGAGGGGATGACCAAATCCCGCATGGTGCCCTTTACCCAAACTGCCGATCGCCTGCCGCGGGCCA
TTCGGGAAGTGTCCATGAAGCTCAATAAAAGGGTCAACCTGGAGGTGGAAGGGGGCGATGTGCTAATCGACAAAATGATT
TTGGAGCACCTCTACAACCCCATGACCCACCTGGTTAACAATGCCATCACCCACGGCATTGAAACCCCAGCGCAACGGCA
ACAATTGGGCAAATCTGCCGAAGGACATCTCGCCGTGCGGGCCTTTCTTCAAGGAAACCAGACCCTGATTACTGTCTCCG
ATGATGGAGCTGGCATCAACACGGAAATGGTCAAACAAAAGGCGGTGGAAAAGGGTCTCATCACCCGGATGGAGGCCCAG
AGTCTATCCCAATCGGAAGTGTATGACCTCTTGTTCCATGCCGGCTTTAGCACCAAGGATACGGCAGACGACTTTGCCGG
TAGGGGGGTAGGTCTGGATGTGGTACGCACCAGTTTGATTGATATCCGGGGAGCCATTAACATTGACTCCACTGTGGGTA
AGGGCACCACTTTTACCATCCGTTTGCCCCTCACCCTGAGCATTTGCAAAGCCCTCTGTTGTCTGAGCGATCGGGCTCGC
ATCGCCTTTCCCATGGACGGGGTGGAAGATACCAGGGACTATCTGCCCAAGGACATTGTCACCGATGAAGATGGTCAAAA
GTGCGTCAGATACGGCAAGGAAGCCTTGCTTTTACCCCTCTATCCCCTCAAAGATCTGCTCAACTATAACCGTCAATTGA
GCCGGGGGAGTGTTTATGGCGGCAAGCAAGAGGACGATGTGGTGCGGGTCATCATCGCCCGAGGCAGTTCTGGTAACCTC
CTAGCCCTGCAGATAGACCAGATCCTAGGGGAAGAAGAAATTGTGATCAAACAGATTGAAGGACCCATTCCCAAACCCCC
TGGTATTGCCGGGGCTACTGTGCGGGGGGATGGCAGTATCATGCCCATCGCCGATGTTTTAGAACTGATCGAAATTGCCC
AGGGTCGTCTCCGCACCGACAGTAGTGGCGGACTATGGCGCAAAACCCTCACCCCCACAGCCAATGAAGTCCACATGGAC
CCCACCGTACTGATTGTGGACGACTCCATTACGGTGCGGGAACTGCTATCCCTCAGCTTCAAAAAAGCGGGTTTCCGGGT
GGAGCAAGCTCGGGATGGTCAAGAAGCTTGGGAGCAGTTGAAGTCTGGGCTACCCTGTGATTTGGTCTTCTGTGACATTG
AGATGCCGCGTAAGAATGGCTTGGAATTGTTGTCGGAATTGCAAGCAGACGAAGAACTTTCTTCCATTCCAGTGGCCTTG
CTCACTTCTCGGGGAGCCGATCGCCATCGCAAAGTGGCGGCCAAGCTGGGGGCAACGGGTTATTTCACTAAGCCCTATAC
AGAAAAAGACATTTTGGATGCGGCTAACCGGATGTTGAGTGGAGAAGTATTACTCCCTGGCAGTACCCGCAAAACTAATT
CCATTCTGTCCCGCTTCAAAAAAGCCCGGGGCAACTTTTCTGAGGAAGCTCCTACCATTGTGAAGAGTAACCCTGGCACC
CTACGTTCAACGGTGTTAATTATCGATGACTCGGTAATGGTACGGGAAATGCTTTCCATGACCTTTAAAAAAGCCGATTA
CCACACAGAAACCGCCCGGGATGGCCAGGATGCTTGGGAAAAACTCAAGTCCGGCTTACCCTGTGATTTGATTCTCTGTG
ACATTGAAATGCCCCGCATGAACGGCCTGGAATTATTGGAGCGCATTCAAGAAGATCCCAACCTTTCCCGTATCCCAGTG
GCCATGATTACCTCCCGGGGAGCACAAAAAATGCAGCGCATGGCGGCGGAGAAAGGTGCCAAGGGATACTTTGTGAAGCC
ATACATTGAGGAAACTTTATTGGAAGCCAGTCAAAGGTTGATAAGAGGAGAAGTGTTGCTGGATTTGGCCGCCCTAAGTG
CAGAAGAGTAA

Domains

Predicted by InterproScan.

• CheW-like domain (CheW) (631-771)

• Response regulator receiver domain (Response_reg) (803-915)

• Response regulator receiver domain (Response_reg) (965-1076)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (488-625)

• Signal transducing histidine kinase, homodimeric domain (H-kinase_dim) (276-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilL-C	Synechocystis sp. PCC 6803	94.799	100	0.948