Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   INQ43_RS10360 Genome accession   NZ_CP063658
Coordinates   2278337..2278735 (-) Length   132 a.a.
NCBI ID   WP_194034183.1    Uniprot ID   -
Organism   Lysobacter sp. H23M47     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2273337..2283735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ43_RS10345 (INQ43_10345) - 2275310..2277331 (-) 2022 WP_194036386.1 methyl-accepting chemotaxis protein -
  INQ43_RS10350 (INQ43_10350) - 2277399..2277932 (-) 534 Protein_2019 chemotaxis protein CheW -
  INQ43_RS10355 (INQ43_10355) - 2277953..2278318 (-) 366 WP_194034182.1 response regulator -
  INQ43_RS10360 (INQ43_10360) pilG 2278337..2278735 (-) 399 WP_194034183.1 twitching motility response regulator PilG Regulator
  INQ43_RS10365 (INQ43_10365) gshB 2278930..2279883 (+) 954 WP_194036387.1 glutathione synthase -
  INQ43_RS10370 (INQ43_10370) - 2279880..2280755 (+) 876 WP_194034185.1 energy transducer TonB -
  INQ43_RS10375 (INQ43_10375) tsaB 2280765..2281523 (-) 759 WP_194034186.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  INQ43_RS10380 (INQ43_10380) - 2281520..2283649 (-) 2130 WP_194036388.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14746.05 Da        Isoelectric Point: 7.8248

>NTDB_id=496172 INQ43_RS10360 WP_194034183.1 2278337..2278735(-) (pilG) [Lysobacter sp. H23M47]
MQDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQKPQIIFVDIMMPRLDGYQTCALIKN
NQVFKNTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRGELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=496172 INQ43_RS10360 WP_194034183.1 2278337..2278735(-) (pilG) [Lysobacter sp. H23M47]
ATGCAAGACGAGGTCCGCAGCGGCAGCCTCGATGGGCTGCGAGTCATGGTGATCGACGACTCAAAGACCATCCGCCGCAC
CGCTGAAACATTGCTCAAGCGCGAAGGCTGCGAAGTAGTGACCGCCACCGATGGTTTCGAGGCACTGGCCAAGATCGCCG
ACCAGAAGCCGCAGATCATCTTTGTCGACATCATGATGCCGCGGCTGGATGGCTATCAGACCTGTGCATTGATCAAGAAC
AACCAGGTTTTCAAGAACACACCCGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCCGTGGCCGCATCGT
CGGCTCCGAGCAGTACCTGACCAAACCATTCACGCGCGGGGAACTCCTCGACGCCATACGAACACACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.939

0.705