Detailed information NTG0049617

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSUJS14_RS00820
• Genome accession: NC_017618
• Coordinates: 122695..123129 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis JS14
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117695..128129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUJS14_RS00785 (SSUJS14_0123)	-	118444..118809 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSUJS14_RS00790 (SSUJS14_0125)	-	118844..119787 (-)	944	Protein_114	S66 peptidase family protein	-
SSUJS14_RS00795 (SSUJS14_0126)	comYA	119873..120823 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSUJS14_RS00800 (SSUJS14_0127)	comYB	120735..121772 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSUJS14_RS00805 (SSUJS14_0128)	comYC	121774..122055 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSUJS14_RS00810 (SSUJS14_0129)	comGD	122036..122443 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
SSUJS14_RS00815 (SSUJS14_0130)	comYE	122415..122708 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSUJS14_RS00820 (SSUJS14_0131)	comGF/cglF	122695..123129 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSUJS14_RS00825 (SSUJS14_0132)	comGG	123107..123517 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
SSUJS14_RS00830 (SSUJS14_0133)	comYH	123574..124527 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSUJS14_RS00835 (SSUJS14_0134)	-	124577..125764 (+)	1188	WP_012775422.1	acetate kinase	-
SSUJS14_RS00840 (SSUJS14_0136)	-	126079..126630 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
SSUJS14_RS00845 (SSUJS14_0137)	-	126686..127942 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=49617 SSUJS14_RS00820 WP_011922561.1 122695..123129(+) (comGF/cglF) [Streptococcus suis JS14]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=49617 SSUJS14_RS00820 WP_011922561.1 122695..123129(+) (comGF/cglF) [Streptococcus suis JS14]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444