Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   INQ42_RS10300 Genome accession   NZ_CP063657
Coordinates   2275928..2276326 (-) Length   132 a.a.
NCBI ID   WP_194034183.1    Uniprot ID   -
Organism   Novilysobacter avium strain H23M41     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2270928..2281326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ42_RS10285 (INQ42_10285) - 2272901..2274922 (-) 2022 WP_194034181.1 methyl-accepting chemotaxis protein -
  INQ42_RS10290 (INQ42_10290) - 2274990..2275523 (-) 534 Protein_2015 chemotaxis protein CheW -
  INQ42_RS10295 (INQ42_10295) - 2275544..2275909 (-) 366 WP_194034182.1 PleD family two-component system response regulator -
  INQ42_RS10300 (INQ42_10300) pilG 2275928..2276326 (-) 399 WP_194034183.1 twitching motility response regulator PilG Regulator
  INQ42_RS10305 (INQ42_10305) gshB 2276521..2277474 (+) 954 WP_194034184.1 glutathione synthase -
  INQ42_RS10310 (INQ42_10310) - 2277471..2278346 (+) 876 WP_194034185.1 energy transducer TonB -
  INQ42_RS10315 (INQ42_10315) tsaB 2278356..2279114 (-) 759 WP_194034186.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  INQ42_RS10320 (INQ42_10320) - 2279111..2281240 (-) 2130 WP_194034187.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14746.05 Da        Isoelectric Point: 7.8248

>NTDB_id=496154 INQ42_RS10300 WP_194034183.1 2275928..2276326(-) (pilG) [Novilysobacter avium strain H23M41]
MQDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQKPQIIFVDIMMPRLDGYQTCALIKN
NQVFKNTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRGELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=496154 INQ42_RS10300 WP_194034183.1 2275928..2276326(-) (pilG) [Novilysobacter avium strain H23M41]
ATGCAAGACGAGGTCCGCAGCGGCAGCCTCGATGGGCTGCGAGTCATGGTGATCGACGACTCAAAGACCATCCGCCGCAC
CGCTGAAACATTGCTCAAGCGCGAAGGCTGCGAAGTAGTGACCGCCACCGATGGTTTCGAGGCACTGGCCAAGATCGCCG
ACCAGAAGCCGCAGATCATCTTTGTCGACATCATGATGCCGCGGCTGGATGGCTATCAGACCTGTGCATTGATCAAGAAC
AACCAGGTTTTCAAGAACACACCCGTGATCATGCTGTCATCCAAGGACGGCCTGTTCGACAAGGCCCGTGGCCGCATCGT
CGGCTCCGAGCAGTACCTGACCAAACCATTCACGCGCGGGGAACTCCTCGACGCCATACGAACACACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.939

0.705