Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   INQ41_RS10810 Genome accession   NZ_CP063656
Coordinates   2395619..2396017 (-) Length   132 a.a.
NCBI ID   WP_043957694.1    Uniprot ID   -
Organism   Novilysobacter ciconiae strain H21R20     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2390619..2401017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ41_RS10795 (INQ41_10795) - 2392592..2394613 (-) 2022 WP_193984378.1 methyl-accepting chemotaxis protein -
  INQ41_RS10800 (INQ41_10800) - 2394681..2395238 (-) 558 Protein_2110 chemotaxis protein CheW -
  INQ41_RS10805 (INQ41_10805) - 2395235..2395600 (-) 366 WP_193984380.1 PleD family two-component system response regulator -
  INQ41_RS10810 (INQ41_10810) pilG 2395619..2396017 (-) 399 WP_043957694.1 twitching motility response regulator PilG Regulator
  INQ41_RS10815 (INQ41_10815) gshB 2396212..2397165 (+) 954 WP_193984382.1 glutathione synthase -
  INQ41_RS10820 (INQ41_10820) - 2397162..2398037 (+) 876 WP_193984384.1 energy transducer TonB -
  INQ41_RS10825 (INQ41_10825) tsaB 2398047..2398802 (-) 756 WP_193984386.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  INQ41_RS10830 (INQ41_10830) - 2398799..2400928 (-) 2130 WP_193984388.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14769.09 Da        Isoelectric Point: 7.8566

>NTDB_id=496133 INQ41_RS10810 WP_043957694.1 2395619..2396017(-) (pilG) [Novilysobacter ciconiae strain H21R20]
MQDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQKPQIIFVDIMMPRLDGYQTCALIKN
NQVFKHTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRGELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=496133 INQ41_RS10810 WP_043957694.1 2395619..2396017(-) (pilG) [Novilysobacter ciconiae strain H21R20]
ATGCAAGACGAGGTCCGCAGCGGCAGCCTCGATGGGCTGCGAGTCATGGTGATCGACGACTCAAAGACCATCCGCCGCAC
CGCTGAAACATTGCTCAAGCGCGAAGGCTGCGAAGTAGTGACCGCCACCGATGGGTTCGAGGCACTGGCCAAGATCGCCG
ACCAGAAGCCGCAGATCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGGTATCAGACCTGCGCATTGATCAAGAAC
AACCAGGTTTTCAAGCACACACCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCATCGT
CGGCTCCGAGCAGTACCTGACCAAACCATTCACGCGCGGGGAACTCCTCGACGCCATACGAACACACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697