Detailed information NTG0496116

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP359_RS07615
• Genome accession: NZ_CP063535
• Coordinates: 1475432..1476595 (-)
• Length: 387 a.a.
• NCBI ID: WP_101313248.1
• Uniprot ID: A0A2N3PHA8
• Organism: Helicobacter winghamensis strain ATCC BAA-431
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1470432..1481595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP359_RS07590 (IP359_07555)	-	1471359..1472258 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP359_RS07595 (IP359_07560)	-	1472282..1473397 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
IP359_RS07600 (IP359_07565)	-	1473585..1474127 (-)	543	WP_370521293.1	YceI family protein	-
IP359_RS07605 (IP359_07570)	-	1474252..1474905 (+)	654	WP_101313247.1	thioredoxin domain-containing protein	-
IP359_RS07610 (IP359_07575)	-	1474989..1475390 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
IP359_RS07615 (IP359_07580)	kpsS	1475432..1476595 (-)	1164	WP_101313248.1	capsule biosynthesis protein	Regulator
IP359_RS07620 (IP359_07585)	-	1476561..1478636 (-)	2076	WP_006803058.1	capsular polysaccharide biosynthesis protein	-
IP359_RS07625 (IP359_07590)	-	1478782..1478973 (-)	192	WP_040498761.1	hypothetical protein	-
IP359_RS07630 (IP359_07595)	-	1479374..1480054 (-)	681	WP_101313249.1	nucleotidyltransferase family protein	-
IP359_RS07635 (IP359_07600)	-	1480042..1480647 (-)	606	WP_006803056.1	SIS domain-containing protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45886.22 Da
• Isoelectric Point: 10.0516

>NTDB_id=496116 IP359_RS07615 WP_101313248.1 1475432..1476595(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-431]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDRDFYLKYSPKEFESKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIETLSLKFNVEGRVLYVHDLHLPTLLTNARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496116 IP359_RS07615 WP_101313248.1 1475432..1476595(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-431]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGGATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAGAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGTGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGACTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAACAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

3D structure

• AlphaFold DB: A0A2N3PHA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.579	98.191	0.605