Detailed information NTG0496107

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP358_RS07420
• Genome accession: NZ_CP063533
• Coordinates: 1439262..1440425 (-)
• Length: 387 a.a.
• NCBI ID: WP_006803059.1
• Uniprot ID: -
• Organism: Helicobacter winghamensis ATCC BAA-430
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1434262..1445425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP358_RS07395 (IP358_07355)	-	1435189..1436088 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP358_RS07400 (IP358_07360)	-	1436112..1437227 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
IP358_RS07405 (IP358_07365)	-	1437415..1437957 (-)	543	WP_006803062.1	YceI family protein	-
IP358_RS07410 (IP358_07370)	-	1438082..1438735 (+)	654	WP_006803061.1	thioredoxin domain-containing protein	-
IP358_RS07415 (IP358_07375)	-	1438819..1439220 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
IP358_RS07420 (IP358_07380)	kpsS	1439262..1440425 (-)	1164	WP_006803059.1	capsule biosynthesis protein	Regulator
IP358_RS07425 (IP358_07385)	-	1440391..1442466 (-)	2076	WP_006803058.1	capsular polysaccharide biosynthesis protein	-
IP358_RS07430 (IP358_07390)	-	1442613..1442804 (-)	192	WP_040498761.1	hypothetical protein	-
IP358_RS07435 (IP358_07395)	-	1443205..1443885 (-)	681	WP_006803057.1	nucleotidyltransferase family protein	-
IP358_RS07440 (IP358_07400)	-	1443873..1444478 (-)	606	WP_006803056.1	SIS domain-containing protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45885.27 Da
• Isoelectric Point: 10.1195

>NTDB_id=496107 IP358_RS07420 WP_006803059.1 1439262..1440425(-) (kpsS) [Helicobacter winghamensis ATCC BAA-430]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDRDFYLKYSPKEFKSKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIETLSLKFNVEGRVLYVHDLHLPTLLTNARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496107 IP358_RS07420 WP_006803059.1 1439262..1440425(-) (kpsS) [Helicobacter winghamensis ATCC BAA-430]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGGATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAGAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTAAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGTGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGACTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAACAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.316	98.191	0.602