Detailed information NTG0496097

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP360_RS07655
• Genome accession: NZ_CP063532
• Coordinates: 1488566..1489729 (-)
• Length: 387 a.a.
• NCBI ID: WP_370522264.1
• Uniprot ID: -
• Organism: Helicobacter winghamensis strain ATCC BAA-434
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1483566..1494729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP360_RS07630 (IP360_07590)	-	1484489..1485388 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP360_RS07635 (IP360_07595)	-	1485412..1486527 (-)	1116	WP_370522260.1	ABC transporter substrate-binding protein	-
IP360_RS07640 (IP360_07600)	-	1486717..1487259 (-)	543	WP_370522261.1	YceI family protein	-
IP360_RS07645 (IP360_07605)	-	1487386..1488039 (+)	654	WP_370522262.1	thioredoxin domain-containing protein	-
IP360_RS07650 (IP360_07610)	-	1488123..1488524 (+)	402	WP_370522263.1	hypothetical protein	-
IP360_RS07655 (IP360_07615)	kpsS	1488566..1489729 (-)	1164	WP_370522264.1	capsule biosynthesis protein	Regulator
IP360_RS07660 (IP360_07620)	-	1489695..1491728 (-)	2034	WP_370522265.1	capsular polysaccharide biosynthesis protein	-
IP360_RS07665 (IP360_07625)	-	1491814..1493703 (-)	1890	WP_370523410.1	hypothetical protein	-
IP360_RS07670 (IP360_07630)	-	1493700..1494371 (-)	672	WP_370522267.1	nucleotidyltransferase family protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45824.23 Da
• Isoelectric Point: 10.0459

>NTDB_id=496097 IP360_RS07655 WP_370522264.1 1488566..1489729(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-434]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDKDFYLKYSPKEFESKRFSGTFLKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIEALSLKFNVEGRVLYVHDLHLPTLLANARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496097 IP360_RS07655 WP_370522264.1 1488566..1489729(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-434]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAGGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGAATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAAAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTTAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGCGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGGCTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAGCAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.842	98.191	0.607