Detailed information NTG0496086

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP361_RS07640
• Genome accession: NZ_CP063531
• Coordinates: 1488288..1489451 (-)
• Length: 387 a.a.
• NCBI ID: WP_370522264.1
• Uniprot ID: -
• Organism: Helicobacter winghamensis strain ATCC BAA-435
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1483288..1494451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP361_RS07615 (IP361_07600)	-	1484211..1485110 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP361_RS07620 (IP361_07605)	-	1485134..1486249 (-)	1116	WP_370522260.1	ABC transporter substrate-binding protein	-
IP361_RS07625 (IP361_07610)	-	1486439..1486981 (-)	543	WP_370522261.1	YceI family protein	-
IP361_RS07630 (IP361_07615)	-	1487108..1487761 (+)	654	WP_370522262.1	thioredoxin domain-containing protein	-
IP361_RS07635 (IP361_07620)	-	1487845..1488246 (+)	402	WP_370522263.1	hypothetical protein	-
IP361_RS07640 (IP361_07625)	kpsS	1488288..1489451 (-)	1164	WP_370522264.1	capsule biosynthesis protein	Regulator
IP361_RS07645 (IP361_07630)	-	1489417..1491450 (-)	2034	WP_370522265.1	capsular polysaccharide biosynthesis protein	-
IP361_RS07650 (IP361_07635)	-	1491510..1493426 (-)	1917	WP_370522266.1	hypothetical protein	-
IP361_RS07655 (IP361_07640)	-	1493423..1494094 (-)	672	WP_370522267.1	nucleotidyltransferase family protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45824.23 Da
• Isoelectric Point: 10.0459

>NTDB_id=496086 IP361_RS07640 WP_370522264.1 1488288..1489451(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-435]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDKDFYLKYSPKEFESKRFSGTFLKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIEALSLKFNVEGRVLYVHDLHLPTLLANARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496086 IP361_RS07640 WP_370522264.1 1488288..1489451(-) (kpsS) [Helicobacter winghamensis strain ATCC BAA-435]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAGGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGAATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAAAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTTAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGCGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGGCTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAGCAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.842	98.191	0.607