Detailed information NTG0496067

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP363_RS07335
• Genome accession: NZ_CP063529
• Coordinates: 1435584..1436747 (-)
• Length: 387 a.a.
• NCBI ID: WP_101313248.1
• Uniprot ID: A0A2N3PHA8
• Organism: Helicobacter winghamensis strain DoED 18-7711
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1430584..1441747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP363_RS07310 (IP363_07285)	-	1431511..1432410 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP363_RS07315 (IP363_07290)	-	1432434..1433549 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
IP363_RS07320 (IP363_07295)	-	1433737..1434279 (-)	543	WP_006803062.1	YceI family protein	-
IP363_RS07325 (IP363_07300)	-	1434404..1435057 (+)	654	WP_101313247.1	thioredoxin domain-containing protein	-
IP363_RS07330 (IP363_07305)	-	1435141..1435542 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
IP363_RS07335 (IP363_07310)	kpsS	1435584..1436747 (-)	1164	WP_101313248.1	capsule biosynthesis protein	Regulator
IP363_RS07340 (IP363_07315)	-	1436713..1438788 (-)	2076	WP_006803058.1	capsular polysaccharide biosynthesis protein	-
IP363_RS07345 (IP363_07320)	-	1438935..1439126 (-)	192	WP_040498761.1	hypothetical protein	-
IP363_RS07350 (IP363_07325)	-	1439527..1440207 (-)	681	WP_101313249.1	nucleotidyltransferase family protein	-
IP363_RS07355 (IP363_07330)	-	1440195..1440800 (-)	606	WP_006803056.1	SIS domain-containing protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45886.22 Da
• Isoelectric Point: 10.0516

>NTDB_id=496067 IP363_RS07335 WP_101313248.1 1435584..1436747(-) (kpsS) [Helicobacter winghamensis strain DoED 18-7711]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDRDFYLKYSPKEFESKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIETLSLKFNVEGRVLYVHDLHLPTLLTNARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496067 IP363_RS07335 WP_101313248.1 1435584..1436747(-) (kpsS) [Helicobacter winghamensis strain DoED 18-7711]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGGATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAGAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGTGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGACTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAACAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

3D structure

• AlphaFold DB: A0A2N3PHA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.579	98.191	0.605