Detailed information NTG0496057

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: IP364_RS07580
• Genome accession: NZ_CP063528
• Coordinates: 1468887..1470050 (-)
• Length: 387 a.a.
• NCBI ID: WP_370524685.1
• Uniprot ID: -
• Organism: Helicobacter winghamensis strain DoED 19-02049
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1463887..1475050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IP364_RS07555 (IP364_07495)	-	1464813..1465712 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
IP364_RS07560 (IP364_07500)	-	1465736..1466851 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
IP364_RS07565 (IP364_07505)	-	1467039..1467581 (-)	543	WP_370524682.1	YceI family protein	-
IP364_RS07570 (IP364_07510)	-	1467706..1468359 (+)	654	WP_370524684.1	thioredoxin domain-containing protein	-
IP364_RS07575 (IP364_07515)	-	1468443..1468844 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
IP364_RS07580 (IP364_07520)	kpsS	1468887..1470050 (-)	1164	WP_370524685.1	capsule biosynthesis protein	Regulator
IP364_RS07585 (IP364_07525)	-	1470016..1472049 (-)	2034	WP_370524686.1	capsular polysaccharide biosynthesis protein	-
IP364_RS07590 (IP364_07530)	-	1472109..1474025 (-)	1917	WP_370524687.1	hypothetical protein	-
IP364_RS07595 (IP364_07535)	-	1474013..1474693 (-)	681	WP_370524688.1	nucleotidyltransferase family protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45798.15 Da
• Isoelectric Point: 10.0459

>NTDB_id=496057 IP364_RS07580 WP_370524685.1 1468887..1470050(-) (kpsS) [Helicobacter winghamensis strain DoED 19-02049]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDKDFYLKYSPKEFESKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIEALSLKFNVEGRVLYVHDLHLPTLLANARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=496057 IP364_RS07580 WP_370524685.1 1468887..1470050(-) (kpsS) [Helicobacter winghamensis strain DoED 19-02049]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGTGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATTCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGAATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAAAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGCGTGAATACAAAAA
TTTTATCGCTTAAACAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGGCTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAGCAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.842	98.191	0.607