Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BJAB0715_RS13925 Genome accession   NC_021733
Coordinates   2885512..2886453 (-) Length   313 a.a.
NCBI ID   WP_020753360.1    Uniprot ID   -
Organism   Acinetobacter baumannii BJAB0715     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2880512..2891453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJAB0715_RS13910 (BJAB0715_02788) bauB 2882823..2883791 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  BJAB0715_RS13915 (BJAB0715_02789) bauE 2883798..2884568 (-) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  BJAB0715_RS13920 (BJAB0715_02790) bauC 2884565..2885512 (-) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  BJAB0715_RS13925 (BJAB0715_02791) ceuB 2885512..2886453 (-) 942 WP_020753360.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  BJAB0715_RS20645 (BJAB0715_02792) - 2886453..2886584 (-) 132 WP_002036877.1 hypothetical protein -
  BJAB0715_RS13930 (BJAB0715_02793) basB 2887085..2889115 (+) 2031 WP_139161446.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  BJAB0715_RS13935 (BJAB0715_02794) basA 2889186..2891033 (-) 1848 WP_000910243.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34004.12 Da        Isoelectric Point: 8.6941

>NTDB_id=49600 BJAB0715_RS13925 WP_020753360.1 2885512..2886453(-) (ceuB) [Acinetobacter baumannii BJAB0715]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTILVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=49600 BJAB0715_RS13925 WP_020753360.1 2885512..2886453(-) (ceuB) [Acinetobacter baumannii BJAB0715]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGATTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422

Multiple sequence alignment