Detailed information NTG0495897

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM00_RS01125
• Genome accession: NZ_CP074946
• Coordinates: 236629..237612 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 05_3471
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 231629..242612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM00_RS01105	-	232077..232577 (+)	501	WP_000469071.1	hypothetical protein	-
KIM00_RS01110 (KIM00_01100)	dppA	232929..234536 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM00_RS01115 (KIM00_01105)	dppB	234687..235706 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM00_RS01120 (KIM00_01110)	dppC	235716..236618 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM00_RS01125 (KIM00_01115)	amiE	236629..237612 (+)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM00_RS01130 (KIM00_01120)	dppF	237609..238613 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM00_RS01135 (KIM00_01125)	yhjV	238643..239914 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM00_RS01140 (KIM00_01130)	-	240390..240497 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM00_RS01145 (KIM00_01135)	-	240873..240980 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM00_RS01150 (KIM00_01140)	-	241356..241463 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM00_RS01155 (KIM00_01145)	-	241839..241946 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495897 KIM00_RS01125 WP_001196495.1 236629..237612(+) (amiE) [Escherichia coli strain 05_3471]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495897 KIM00_RS01125 WP_001196495.1 236629..237612(+) (amiE) [Escherichia coli strain 05_3471]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401