Detailed information NTG0495722

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM03_RS26360
• Genome accession: NZ_CP074936
• Coordinates: 5199298..5200281 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 06_3288
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5194298..5205281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM03_RS26330 (KIM03_26055)	-	5194962..5195069 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM03_RS26335 (KIM03_26060)	-	5195445..5195552 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM03_RS26340 (KIM03_26065)	-	5195930..5196037 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM03_RS26345 (KIM03_26070)	-	5196413..5196520 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM03_RS26350 (KIM03_26075)	yhjV	5196996..5198267 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM03_RS26355 (KIM03_26080)	dppF	5198297..5199301 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM03_RS26360 (KIM03_26085)	amiE	5199298..5200281 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM03_RS26365 (KIM03_26090)	dppC	5200292..5201194 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM03_RS26370 (KIM03_26095)	dppB	5201204..5202223 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM03_RS26375 (KIM03_26100)	dppA	5202374..5203981 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM03_RS26380	-	5204333..5204842 (-)	510	WP_000670972.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495722 KIM03_RS26360 WP_001196495.1 5199298..5200281(-) (amiE) [Escherichia coli strain 06_3288]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495722 KIM03_RS26360 WP_001196495.1 5199298..5200281(-) (amiE) [Escherichia coli strain 06_3288]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401