Detailed information NTG0495643

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM04_RS25845
• Genome accession: NZ_CP074932
• Coordinates: 5134991..5135974 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 07_3337
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5129991..5140974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM04_RS25815 (KIM04_25545)	-	5130655..5130762 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM04_RS25820 (KIM04_25550)	-	5131138..5131245 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM04_RS25825 (KIM04_25555)	-	5131623..5131730 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM04_RS25830 (KIM04_25560)	-	5132106..5132213 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM04_RS25835 (KIM04_25565)	yhjV	5132689..5133960 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM04_RS25840 (KIM04_25570)	dppF	5133990..5134994 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM04_RS25845 (KIM04_25575)	amiE	5134991..5135974 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM04_RS25850 (KIM04_25580)	dppC	5135985..5136887 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM04_RS25855 (KIM04_25585)	dppB	5136897..5137916 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM04_RS25860 (KIM04_25590)	dppA	5138067..5139674 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM04_RS25865	-	5140026..5140526 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495643 KIM04_RS25845 WP_001196495.1 5134991..5135974(-) (amiE) [Escherichia coli strain 07_3337]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495643 KIM04_RS25845 WP_001196495.1 5134991..5135974(-) (amiE) [Escherichia coli strain 07_3337]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401