Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   BJAB0715_RS01615 Genome accession   NC_021733
Coordinates   343731..344057 (+) Length   108 a.a.
NCBI ID   WP_000801427.1    Uniprot ID   A0A151YUA4
Organism   Acinetobacter baumannii BJAB0715     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 338731..349057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJAB0715_RS01590 (BJAB0715_00310) - 339180..339947 (+) 768 WP_000897416.1 uroporphyrinogen-III synthase -
  BJAB0715_RS01595 (BJAB0715_00311) - 339956..340795 (+) 840 WP_001230210.1 hypothetical protein -
  BJAB0715_RS01600 (BJAB0715_00312) - 340805..341998 (+) 1194 WP_000681780.1 membrane protein -
  BJAB0715_RS01605 (BJAB0715_00313) - 342006..342446 (+) 441 WP_000661569.1 thioesterase family protein -
  BJAB0715_RS01610 (BJAB0715_00314) - 342546..343514 (-) 969 WP_032495426.1 IS30 family transposase -
  BJAB0715_RS01615 (BJAB0715_00315) hns 343731..344057 (+) 327 WP_000801427.1 H-NS histone family protein Regulator
  BJAB0715_RS01620 (BJAB0715_00316) gspN 344389..345132 (+) 744 WP_020752739.1 type II secretion system protein N -
  BJAB0715_RS01625 (BJAB0715_00317) - 345132..345968 (+) 837 WP_020752740.1 type II secretion system protein N -
  BJAB0715_RS01630 (BJAB0715_00318) gspD 346010..348286 (+) 2277 WP_001196426.1 type II secretion system secretin GspD -
  BJAB0715_RS01635 (BJAB0715_00319) - 348327..348956 (+) 630 WP_000219964.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12462.12 Da        Isoelectric Point: 5.0524

>NTDB_id=49561 BJAB0715_RS01615 WP_000801427.1 343731..344057(+) (hns) [Acinetobacter baumannii BJAB0715]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=49561 BJAB0715_RS01615 WP_000801427.1 343731..344057(+) (hns) [Acinetobacter baumannii BJAB0715]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGCCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains


Predicted by InterProScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A151YUA4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

100

100

1


Multiple sequence alignment