Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IMI45_RS17125 Genome accession   NZ_CP063414
Coordinates   3354340..3355287 (-) Length   315 a.a.
NCBI ID   WP_003248209.1    Uniprot ID   A0A6G9IZJ5
Organism   Parageobacillus thermoglucosidasius strain 23.6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3349340..3360287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMI45_RS17100 (IMI45_16900) bioD 3350034..3350753 (-) 720 WP_003248217.1 dethiobiotin synthase -
  IMI45_RS17105 (IMI45_16905) - 3350753..3351316 (-) 564 WP_256833330.1 biotin transporter BioY -
  IMI45_RS17110 (IMI45_16910) - 3351563..3352522 (-) 960 WP_256833332.1 siderophore ABC transporter substrate-binding protein -
  IMI45_RS17115 (IMI45_16915) - 3352645..3353403 (-) 759 WP_003248213.1 ABC transporter ATP-binding protein -
  IMI45_RS17120 (IMI45_16920) - 3353397..3354347 (-) 951 WP_256833334.1 iron chelate uptake ABC transporter family permease subunit -
  IMI45_RS17125 (IMI45_16925) ceuB 3354340..3355287 (-) 948 WP_003248209.1 ABC transporter permease Machinery gene
  IMI45_RS17130 (IMI45_16930) - 3355742..3356308 (+) 567 WP_003248207.1 FAD-dependent oxidoreductase -
  IMI45_RS17135 (IMI45_16935) - 3356427..3357173 (-) 747 WP_256833337.1 ABC transporter ATP-binding protein -
  IMI45_RS17140 (IMI45_16940) - 3357174..3357950 (-) 777 WP_256833338.1 ABC transporter ATP-binding protein -
  IMI45_RS17145 (IMI45_16945) - 3357947..3359011 (-) 1065 WP_256833339.1 branched-chain amino acid ABC transporter permease -
  IMI45_RS17150 (IMI45_16950) - 3359024..3359905 (-) 882 WP_256833340.1 branched-chain amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34567.84 Da        Isoelectric Point: 9.6176

>NTDB_id=495489 IMI45_RS17125 WP_003248209.1 3354340..3355287(-) (ceuB) [Parageobacillus thermoglucosidasius strain 23.6]
MKKLFILFVILAVASLFIGVQHISLADLLMLKADDVEVLIISRIPRLISIIIAGASMSICGLIMQQLSQNKFVSPTTAGT
MDCARLGILVSLILFASAGPLLKVTVAFLFAFAGTMIFMRILEKVKYKDAIFIPLVGLMFGNIISSMTTFFAYKYNLIQS
ISSWLHGDFSMIIKGRYELLYLSVPLMIVAYMYANRFTIAGMGEEIATNLGLHYRSIVNVGLIIVAATSSVVVLTVGTLP
FLGLIIPNLVTLYYGDHLEKVLPLTALSGAIFVLACDIFGRVVIYPYEIPIGLTVGVIGSGVFLYLLVRRRKQYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=495489 IMI45_RS17125 WP_003248209.1 3354340..3355287(-) (ceuB) [Parageobacillus thermoglucosidasius strain 23.6]
ATGAAAAAGCTGTTTATATTATTCGTCATATTAGCAGTTGCATCTTTATTTATCGGTGTCCAGCATATTTCACTTGCCGA
TTTGCTGATGTTGAAAGCGGATGACGTAGAAGTATTAATAATCAGCCGGATTCCGCGATTGATCAGCATTATTATTGCGG
GTGCCAGCATGAGTATTTGCGGGCTAATTATGCAGCAGTTAAGCCAAAATAAGTTTGTCTCGCCAACGACGGCGGGGACG
ATGGATTGCGCAAGGTTAGGAATTTTAGTGTCATTGATTTTGTTCGCTTCCGCAGGTCCGCTGCTGAAAGTTACGGTCGC
ATTTTTATTTGCTTTTGCTGGTACGATGATTTTTATGAGAATACTTGAAAAAGTGAAATATAAAGACGCCATTTTTATTC
CGCTTGTCGGTTTAATGTTTGGCAATATCATCAGTTCCATGACAACATTTTTCGCGTATAAGTACAATTTAATCCAATCC
ATTTCGTCATGGCTGCATGGCGATTTTTCCATGATTATAAAAGGGCGGTATGAACTGCTTTACTTAAGTGTTCCGCTTAT
GATTGTCGCTTATATGTATGCGAACCGTTTTACGATAGCAGGAATGGGAGAAGAAATCGCGACAAATTTAGGCCTTCATT
ATCGGTCCATCGTCAATGTTGGATTAATCATCGTGGCTGCTACTTCTTCTGTTGTGGTGCTGACGGTCGGGACACTGCCG
TTTTTAGGATTGATTATTCCAAACCTTGTCACATTATATTATGGAGATCATTTAGAGAAAGTCCTGCCTCTGACGGCATT
GTCAGGAGCAATTTTCGTGTTGGCTTGCGATATTTTCGGGCGCGTCGTTATTTATCCGTATGAAATCCCGATCGGTTTGA
CGGTAGGAGTCATTGGCAGCGGCGTATTTTTGTATTTGCTAGTAAGGAGAAGAAAGCAATATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G9IZJ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.984

98.73

0.543