Detailed information NTG0495486

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM06_RS28745
• Genome accession: NZ_CP074924
• Coordinates: 5551006..5551989 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 07_3722
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5546006..5556989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM06_RS28715 (KIM06_28315)	-	5546672..5546779 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM06_RS28720 (KIM06_28320)	-	5547155..5547262 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM06_RS28725 (KIM06_28325)	-	5547638..5547745 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM06_RS28730 (KIM06_28330)	-	5548121..5548228 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM06_RS28735 (KIM06_28335)	yhjV	5548704..5549975 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM06_RS28740 (KIM06_28340)	dppF	5550005..5551009 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM06_RS28745 (KIM06_28345)	amiE	5551006..5551989 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM06_RS28750 (KIM06_28350)	dppC	5552000..5552902 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM06_RS28755 (KIM06_28355)	dppB	5552912..5553931 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM06_RS28760 (KIM06_28360)	dppA	5554082..5555689 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495486 KIM06_RS28745 WP_001196495.1 5551006..5551989(-) (amiE) [Escherichia coli strain 07_3722]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495486 KIM06_RS28745 WP_001196495.1 5551006..5551989(-) (amiE) [Escherichia coli strain 07_3722]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401