Detailed information NTG0495433

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: IM738_RS14600
• Genome accession: NZ_CP063400
• Coordinates: 3082175..3083197 (+)
• Length: 340 a.a.
• NCBI ID: WP_236961599.1
• Uniprot ID: -
• Organism: Hydrogenophaga sp. SL48
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3077175..3088197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM738_RS14575 (IM738_14580)	-	3077715..3078032 (-)	318	WP_236961593.1	YfhL family 4Fe-4S dicluster ferredoxin	-
IM738_RS14580 (IM738_14585)	coaD	3078043..3078561 (-)	519	WP_236961595.1	pantetheine-phosphate adenylyltransferase	-
IM738_RS14585 (IM738_14590)	rsmD	3078585..3079187 (-)	603	WP_236961597.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IM738_RS14590 (IM738_14595)	-	3079357..3080637 (-)	1281	WP_236966325.1	pitrilysin family protein	-
IM738_RS14595 (IM738_14600)	-	3080709..3082076 (-)	1368	WP_236966326.1	pitrilysin family protein	-
IM738_RS14600 (IM738_14605)	pilA	3082175..3083197 (+)	1023	WP_236961599.1	signal recognition particle-docking protein FtsY	Machinery gene
IM738_RS14605 (IM738_14610)	-	3083291..3083725 (-)	435	WP_236961601.1	sigma factor	-
IM738_RS14610 (IM738_14615)	-	3083829..3084329 (+)	501	WP_236961603.1	TlpA disulfide reductase family protein	-
IM738_RS14615 (IM738_14620)	-	3084453..3084734 (+)	282	WP_236961605.1	DUF2282 domain-containing protein	-
IM738_RS14620 (IM738_14625)	-	3084772..3085659 (+)	888	WP_236961607.1	DUF692 domain-containing protein	-
IM738_RS14625 (IM738_14630)	-	3085656..3086522 (+)	867	WP_236961609.1	DNA-binding domain-containing protein	-
IM738_RS14630 (IM738_14635)	-	3086519..3087016 (+)	498	WP_236961611.1	DoxX family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 35525.16 Da
• Isoelectric Point: 7.4231

>NTDB_id=495433 IM738_RS14600 WP_236961599.1 3082175..3083197(+) (pilA) [Hydrogenophaga sp. SL48]
MFSFFRKKSPAPAPTAAPASAPAAPVAAPVAAPAAPEPVAAPRKGWLDKLKAGLRKTGSSIATVFTGTQIDDALYEELET
ALLMADTGVKATEHLLADLKRRVKESKTTDPAAVKGLLAEAIADLLAPLQKPLVIGEHKPTVIMVAGVNGAGKTTSIGKL
TRHLANEGATVLLAAADTFRAAAREQLAVWADRNTVEIITQEGGDPAAVSFDAVSAGKARGKDVVLVDTAGRLPTQLHLM
EELKKIKRVVQKADGTAPHEVLLVIDGNTGQNALMQVKAFDEALGLTGLIITKLDGTAKGGVICAIAREKPVPIYFIGVG
EKLEDLETFDAKEFAQALLS

Nucleotide

• Length: 1023 bp

>NTDB_id=495433 IM738_RS14600 WP_236961599.1 3082175..3083197(+) (pilA) [Hydrogenophaga sp. SL48]
ATGTTCTCGTTCTTCCGAAAAAAATCCCCCGCGCCCGCCCCCACCGCCGCACCCGCCTCTGCGCCCGCAGCACCTGTCGC
CGCCCCGGTGGCGGCGCCTGCGGCGCCCGAGCCGGTCGCGGCACCGCGCAAAGGCTGGCTCGACAAGCTCAAGGCCGGCC
TGCGCAAGACCGGCTCCAGCATCGCCACCGTCTTCACCGGCACGCAGATCGACGACGCACTGTATGAAGAGCTGGAAACC
GCGCTGCTGATGGCCGACACCGGCGTCAAGGCGACCGAGCACCTGCTGGCCGATCTGAAGCGCCGCGTGAAAGAGAGCAA
GACCACCGACCCGGCCGCCGTGAAAGGCCTGCTGGCCGAGGCCATTGCCGACCTGCTGGCGCCGCTGCAGAAACCACTGG
TGATCGGCGAACACAAGCCCACGGTGATCATGGTCGCGGGCGTCAACGGCGCGGGCAAGACCACGTCCATCGGCAAGCTC
ACGCGCCACCTGGCCAACGAAGGCGCCACGGTGCTGCTGGCCGCGGCCGACACCTTCCGGGCCGCCGCGCGCGAGCAGCT
CGCCGTCTGGGCCGACCGCAACACGGTGGAAATCATCACGCAGGAAGGCGGCGACCCGGCCGCCGTGAGCTTTGACGCGG
TCAGCGCCGGCAAGGCTCGCGGCAAGGACGTGGTGCTGGTGGACACGGCGGGCCGCCTGCCGACCCAGCTGCACCTGATG
GAAGAACTGAAGAAGATCAAGCGCGTGGTGCAGAAGGCCGATGGCACGGCGCCGCACGAGGTGCTGCTGGTGATCGATGG
CAACACCGGGCAGAACGCGCTGATGCAGGTGAAGGCGTTTGACGAGGCGCTGGGCCTGACCGGCCTGATCATCACCAAGC
TCGACGGCACGGCCAAGGGCGGCGTGATTTGCGCGATCGCGCGCGAAAAGCCCGTGCCGATCTATTTCATCGGCGTCGGC
GAAAAGCTGGAAGACCTGGAAACCTTCGACGCGAAGGAATTCGCGCAAGCGCTGTTGAGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (59-121)

• SRP54-type protein, GTPase domain (SRP54) (140-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.333	88.235	0.532