Detailed information NTG0495244

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM09_RS25875
• Genome accession: NZ_CP074911
• Coordinates: 5132498..5133481 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 08_3418
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5127498..5138481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM09_RS25845 (KIM09_25585)	-	5128162..5128269 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM09_RS25850 (KIM09_25590)	-	5128645..5128752 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM09_RS25855 (KIM09_25595)	-	5129130..5129237 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM09_RS25860 (KIM09_25600)	-	5129613..5129720 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM09_RS25865 (KIM09_25605)	yhjV	5130196..5131467 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM09_RS25870 (KIM09_25610)	dppF	5131497..5132501 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM09_RS25875 (KIM09_25615)	amiE	5132498..5133481 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM09_RS25880 (KIM09_25620)	dppC	5133492..5134394 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM09_RS25885 (KIM09_25625)	dppB	5134404..5135423 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM09_RS25890 (KIM09_25630)	dppA	5135574..5137181 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM09_RS25895	-	5137533..5138033 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495244 KIM09_RS25875 WP_001196495.1 5132498..5133481(-) (amiE) [Escherichia coli strain 08_3418]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495244 KIM09_RS25875 WP_001196495.1 5132498..5133481(-) (amiE) [Escherichia coli strain 08_3418]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401