Detailed information NTG0049521

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SPYALAB49_RS01390
• Genome accession: NC_017596
• Coordinates: 261360..262283 (+)
• Length: 307 a.a.
• NCBI ID: WP_002986000.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes Alab49
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 256360..267283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYALAB49_RS01375 (SPYALAB49_000283)	amiC	257860..259362 (+)	1503	WP_002992227.1	ABC transporter permease	Regulator
SPYALAB49_RS01380 (SPYALAB49_000284)	amiD	259362..260288 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
SPYALAB49_RS01385 (SPYALAB49_000285)	amiE	260297..261367 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
SPYALAB49_RS01390 (SPYALAB49_000286)	amiF	261360..262283 (+)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
SPYALAB49_RS10115	-	262321..262410 (-)	90	WP_109821088.1	IS3 family transposase	-
SPYALAB49_RS09740 (SPYALAB49_000287)	-	262431..262670 (-)	240	WP_023605208.1	hypothetical protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34715.90 Da
• Isoelectric Point: 6.5113

>NTDB_id=49521 SPYALAB49_RS01390 WP_002986000.1 261360..262283(+) (amiF) [Streptococcus pyogenes Alab49]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=49521 SPYALAB49_RS01390 WP_002986000.1 261360..262283(+) (amiF) [Streptococcus pyogenes Alab49]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818