Detailed information NTG0495085

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM11_RS27905
• Genome accession: NZ_CP074904
• Coordinates: 5426348..5427331 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 08_4358
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5421348..5432331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM11_RS27875 (KIM11_27535)	-	5422014..5422121 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM11_RS27880 (KIM11_27540)	-	5422497..5422604 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM11_RS27885 (KIM11_27545)	-	5422980..5423087 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM11_RS27890 (KIM11_27550)	-	5423463..5423570 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM11_RS27895 (KIM11_27555)	yhjV	5424046..5425317 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM11_RS27900 (KIM11_27560)	dppF	5425347..5426351 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM11_RS27905 (KIM11_27565)	amiE	5426348..5427331 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM11_RS27910 (KIM11_27570)	dppC	5427342..5428244 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM11_RS27915 (KIM11_27575)	dppB	5428254..5429273 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM11_RS27920 (KIM11_27580)	dppA	5429424..5431031 (-)	1608	WP_001222868.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM11_RS27925 (KIM11_27585)	-	5431525..5431692 (+)	168	WP_419771994.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495085 KIM11_RS27905 WP_001196495.1 5426348..5427331(-) (amiE) [Escherichia coli strain 08_4358]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495085 KIM11_RS27905 WP_001196495.1 5426348..5427331(-) (amiE) [Escherichia coli strain 08_4358]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401