Detailed information NTG0494922

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM13_RS26245
• Genome accession: NZ_CP074898
• Coordinates: 5197371..5198354 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2009C_3612
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5192371..5203354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM13_RS26215 (KIM13_25930)	-	5193035..5193142 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM13_RS26220 (KIM13_25935)	-	5193518..5193625 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM13_RS26225 (KIM13_25940)	-	5194003..5194110 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM13_RS26230 (KIM13_25945)	-	5194486..5194593 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM13_RS26235 (KIM13_25950)	yhjV	5195069..5196340 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM13_RS26240 (KIM13_25955)	dppF	5196370..5197374 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM13_RS26245 (KIM13_25960)	amiE	5197371..5198354 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM13_RS26250 (KIM13_25965)	dppC	5198365..5199267 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM13_RS26255 (KIM13_25970)	dppB	5199277..5200296 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM13_RS26260 (KIM13_25975)	dppA	5200447..5202054 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM13_RS26265	-	5202406..5202906 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494922 KIM13_RS26245 WP_001196495.1 5197371..5198354(-) (amiE) [Escherichia coli strain 2009C_3612]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494922 KIM13_RS26245 WP_001196495.1 5197371..5198354(-) (amiE) [Escherichia coli strain 2009C_3612]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401