Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SALIVA_RS08400 Genome accession   NC_017595
Coordinates   1860549..1861625 (-) Length   358 a.a.
NCBI ID   WP_014634969.1    Uniprot ID   A0AAX1YBL4
Organism   Streptococcus salivarius JIM8777     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1855549..1866625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS08375 (SALIVA_1711) - 1855694..1856476 (+) 783 WP_014634965.1 ABC transporter ATP-binding protein -
  SALIVA_RS08380 (SALIVA_1712) - 1856660..1858726 (-) 2067 WP_014634966.1 sodium:proton antiporter -
  SALIVA_RS08385 (SALIVA_1713) - 1858735..1858977 (-) 243 WP_014634967.1 hypothetical protein -
  SALIVA_RS08390 (SALIVA_1714) - 1858974..1859522 (-) 549 WP_014634968.1 class I SAM-dependent methyltransferase -
  SALIVA_RS08395 (SALIVA_1715) - 1859519..1860463 (-) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  SALIVA_RS08400 (SALIVA_1716) sepM 1860549..1861625 (-) 1077 WP_014634969.1 SepM family pheromone-processing serine protease Regulator
  SALIVA_RS08405 (SALIVA_1717) coaD 1861603..1862100 (-) 498 WP_014634970.1 pantetheine-phosphate adenylyltransferase -
  SALIVA_RS08410 (SALIVA_1718) rsmD 1862133..1862732 (-) 600 WP_080568078.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SALIVA_RS08415 (SALIVA_1719) trxB 1862823..1863776 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  SALIVA_RS08420 (SALIVA_1720) - 1863809..1864033 (-) 225 WP_002884393.1 DUF4059 family protein -
  SALIVA_RS08425 (SALIVA_1721) - 1864245..1864988 (-) 744 WP_014634972.1 amino acid ABC transporter ATP-binding protein -
  SALIVA_RS08430 (SALIVA_1722) - 1864988..1865734 (-) 747 WP_148263030.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38973.65 Da        Isoelectric Point: 9.3844

>NTDB_id=49487 SALIVA_RS08400 WP_014634969.1 1860549..1861625(-) (sepM) [Streptococcus salivarius JIM8777]
MANKNESKSLLGKLWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKSFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQNLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=49487 SALIVA_RS08400 WP_014634969.1 1860549..1861625(-) (sepM) [Streptococcus salivarius JIM8777]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAACTTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTAGCTCAAACCAAGGCGACT
TTAGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTGCTTCAGGTGGCTGACGATTCTAGCTTCAAGGGCGTCCTCAAT
ATTGCGGACACGGTGACAGCTGTCAATGGCAAGTCTTTTGATAATTCTGCTGACTTGATTAAATACGTTCAGGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAAAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTTGGCGGCCCAAGTGCGGGTCTTATGTTTACCTTAGCTATTTACGATCAGGTGTCTGGTCAAAATCTTAAGGCTGG
TCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTTAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTTGTACCAAATAATCCGGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.809

95.251

0.617


Multiple sequence alignment