Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   INQ56_RS06995 Genome accession   NZ_CP063360
Coordinates   1374701..1375282 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus altitudinis strain BIM B-263     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1369701..1380282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ56_RS06970 (INQ56_06970) - 1370365..1371543 (+) 1179 WP_193804259.1 N-acetyldiaminopimelate deacetylase -
  INQ56_RS06975 (INQ56_06975) - 1371594..1371836 (+) 243 WP_024424725.1 YkuS family protein -
  INQ56_RS06980 (INQ56_06980) - 1371861..1372670 (-) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  INQ56_RS06985 (INQ56_06985) ahpA 1372942..1373484 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  INQ56_RS06990 (INQ56_06990) - 1373761..1374219 (+) 459 WP_193804260.1 TlpA disulfide reductase family protein -
  INQ56_RS06995 (INQ56_06995) rok 1374701..1375282 (+) 582 WP_017367156.1 hypothetical protein Regulator
  INQ56_RS07000 (INQ56_07000) - 1375345..1376262 (-) 918 WP_041507373.1 hypothetical protein -
  INQ56_RS07005 (INQ56_07005) - 1376347..1376928 (+) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  INQ56_RS07010 (INQ56_07010) - 1376958..1377974 (+) 1017 WP_045034214.1 thiazole biosynthesis adenylyltransferase ThiF -
  INQ56_RS07015 (INQ56_07015) glp 1377984..1379258 (+) 1275 WP_045034215.1 gephyrin-like molybdotransferase Glp -
  INQ56_RS07020 (INQ56_07020) mobB 1379240..1379767 (+) 528 WP_045034297.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  INQ56_RS07025 (INQ56_07025) - 1379760..1380251 (+) 492 WP_045034216.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=494688 INQ56_RS06995 WP_017367156.1 1374701..1375282(+) (rok) [Bacillus altitudinis strain BIM B-263]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=494688 INQ56_RS06995 WP_017367156.1 1374701..1375282(+) (rok) [Bacillus altitudinis strain BIM B-263]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGCCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788