Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | INQ56_RS06705 | Genome accession | NZ_CP063360 |
| Coordinates | 1317674..1319779 (-) | Length | 701 a.a. |
| NCBI ID | WP_193804256.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain BIM B-263 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1312674..1324779
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INQ56_RS06675 (INQ56_06675) | - | 1312916..1313158 (+) | 243 | WP_008346101.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| INQ56_RS06680 (INQ56_06680) | - | 1313210..1314709 (-) | 1500 | WP_193804255.1 | ATP-binding protein | - |
| INQ56_RS06685 (INQ56_06685) | - | 1314914..1315369 (+) | 456 | WP_003211701.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| INQ56_RS06690 (INQ56_06690) | motB | 1315556..1316323 (-) | 768 | WP_024719648.1 | flagellar motor protein MotB | - |
| INQ56_RS06695 (INQ56_06695) | motA | 1316316..1317110 (-) | 795 | WP_008346088.1 | flagellar motor stator protein MotA | - |
| INQ56_RS06705 (INQ56_06705) | clpC | 1317674..1319779 (-) | 2106 | WP_193804256.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| INQ56_RS06710 (INQ56_06710) | - | 1320025..1321068 (+) | 1044 | WP_045035132.1 | membrane protein | - |
| INQ56_RS06715 (INQ56_06715) | queC | 1321344..1322000 (+) | 657 | WP_008348090.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| INQ56_RS06720 (INQ56_06720) | queD | 1322001..1322441 (+) | 441 | WP_039169139.1 | 6-carboxytetrahydropterin synthase QueD | - |
| INQ56_RS06725 (INQ56_06725) | queE | 1322434..1323165 (+) | 732 | WP_024719652.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| INQ56_RS06730 (INQ56_06730) | queF | 1323181..1323678 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| INQ56_RS06735 (INQ56_06735) | - | 1323937..1324155 (+) | 219 | WP_017367128.1 | hypothetical protein | - |
| INQ56_RS06740 (INQ56_06740) | - | 1324280..1324468 (-) | 189 | WP_003211747.1 | YkvS family protein | - |
Sequence
Protein
Download Length: 701 a.a. Molecular weight: 78189.81 Da Isoelectric Point: 5.2335
>NTDB_id=494686 INQ56_RS06705 WP_193804256.1 1317674..1319779(-) (clpC) [Bacillus altitudinis strain BIM B-263]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPNLFGGGSFFSEQAGHATSQERPKQKGLLDELGRN
LTDGAHAGLIDPVIGRDEEVTRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIANGDVPNKLKNKQVYLLDVSSLVA
NTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAFEILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALNEERYEKAAKLRDEEEAIEARLQNKTNDKEHVVTAEDIQSIVEQKTGIPVGKLQADQQTKM
KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSKEAIIRLDMSEYME
KHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSTDKKAVKVGFQSEQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDKDDLVKIVDLLLKDLSEQLKEQNLTVHV
TNEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTDILLEEEQLTGFTVDVEHDEIVVKKS
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPNLFGGGSFFSEQAGHATSQERPKQKGLLDELGRN
LTDGAHAGLIDPVIGRDEEVTRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIANGDVPNKLKNKQVYLLDVSSLVA
NTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAFEILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALNEERYEKAAKLRDEEEAIEARLQNKTNDKEHVVTAEDIQSIVEQKTGIPVGKLQADQQTKM
KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSKEAIIRLDMSEYME
KHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSTDKKAVKVGFQSEQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDKDDLVKIVDLLLKDLSEQLKEQNLTVHV
TNEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTDILLEEEQLTGFTVDVEHDEIVVKKS
Nucleotide
Download Length: 2106 bp
>NTDB_id=494686 INQ56_RS06705 WP_193804256.1 1317674..1319779(-) (clpC) [Bacillus altitudinis strain BIM B-263]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGTAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAACAGTCAAAAATGAAAATGGGTCCTAACCTGTTCGGAGGCGGTTCAT
TCTTCTCTGAGCAAGCAGGACATGCGACGAGCCAAGAGCGGCCTAAACAAAAAGGCTTACTCGATGAGCTTGGCCGGAAT
TTAACGGATGGCGCACATGCTGGTTTAATCGATCCTGTCATTGGCCGTGATGAAGAAGTCACAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCTGGTGTTGGTAAAACGGCCATAGCCGAAGGACTAGCAC
TAAAAATTGCAAATGGAGATGTACCAAATAAATTAAAGAACAAACAAGTTTATTTATTAGATGTCTCTTCACTTGTGGCA
AACACAGGTATACGTGGTCAATTTGAGGAACGGATGAAGCAATTAATCAAAGAATTGCAAAGCCGTAAAAATATCATCTT
ATTCGTTGATGAAATTCATCTTCTTGTAGGCGCAGGCTCTGCCGAAGGGTCAATGGATGCCGGAAACATTTTGAAACCAG
CTCTAGCTCGAGGGGAACTGCAGCTAGTAGGTGCGACAACATTAAAAGAGTATCGTCAGATTGAAAAAGATGCTGCCCTT
GAACGCAGGTTCCAGCCTGTCATCGTTGATGAGCCAACACAGGATGAAGCATTCGAGATCTTAAAAGGCATTCAGGATAA
GTATGAAGCCTATCATGGCGTCACCTATTCTGACGAAGCCATTAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGCCACTTGCCAGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAATTAACAAACCGTCTTGCGCAAATTGCCGCTGAAAAACAAGCTGCTTTAAATGAAGAACGATATGAAAAAGC
AGCGAAGCTTCGAGACGAAGAAGAAGCGATTGAAGCGAGATTGCAAAACAAAACAAATGACAAAGAACATGTCGTCACAG
CTGAGGACATTCAGTCGATTGTAGAACAAAAAACAGGTATCCCTGTCGGCAAACTACAAGCAGACCAACAAACAAAAATG
AAAGAAATTGATGTCCGCTTAAAAGCCCGCGTCATTGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCCGTAAAAAG
AAGCAGAGCCGGCTTAAAATCAAAACATAGACCAACTGGCTCCTTCCTTTTCGTTGGGCCAACAGGCGTCGGGAAAACCG
AATTGTCTAAAACATTAGCGGAAGAATTATTTGGCTCAAAAGAAGCGATCATTCGTTTAGATATGAGTGAGTACATGGAG
AAACATTCCGTGTCCAAAATCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCCGGACAGCTCACGGAAAAGGT
TCGCAGAAAACCATACAGCATCATTTTGCTCGATGAAATCGAAAAAGCGCACCCTGATGTCCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGTCTAACAGACAGCCAAGGCCGAACCGTCAGCTTTAAAGACACAGTCATCATTATGACAAGTAAC
GCTGGCAGCACAGATAAAAAAGCAGTCAAAGTCGGATTCCAGTCTGAACAAGAAGAAGCCATCGAAGAACAATCATTAAT
TGATTCATTGAGCGCTTATTTCAAACCGGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGATAAAG
ACGATTTAGTCAAAATTGTGGATCTTCTGCTCAAAGATTTGTCAGAGCAGTTAAAAGAACAAAATCTAACTGTTCACGTC
ACAAACGAAGCGAAAGAAAAAATCGCTGAACTTGGTTATCATCCAGCATTTGGGGCTCGTCCGTTACGAAGAACGATTCA
AGAGCATGTTGAGGATCAAATGACGGACATCTTGCTTGAAGAAGAACAACTTACTGGATTTACAGTCGATGTTGAACATG
ACGAAATTGTTGTGAAAAAGAGCTAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGTAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAACAGTCAAAAATGAAAATGGGTCCTAACCTGTTCGGAGGCGGTTCAT
TCTTCTCTGAGCAAGCAGGACATGCGACGAGCCAAGAGCGGCCTAAACAAAAAGGCTTACTCGATGAGCTTGGCCGGAAT
TTAACGGATGGCGCACATGCTGGTTTAATCGATCCTGTCATTGGCCGTGATGAAGAAGTCACAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCTGGTGTTGGTAAAACGGCCATAGCCGAAGGACTAGCAC
TAAAAATTGCAAATGGAGATGTACCAAATAAATTAAAGAACAAACAAGTTTATTTATTAGATGTCTCTTCACTTGTGGCA
AACACAGGTATACGTGGTCAATTTGAGGAACGGATGAAGCAATTAATCAAAGAATTGCAAAGCCGTAAAAATATCATCTT
ATTCGTTGATGAAATTCATCTTCTTGTAGGCGCAGGCTCTGCCGAAGGGTCAATGGATGCCGGAAACATTTTGAAACCAG
CTCTAGCTCGAGGGGAACTGCAGCTAGTAGGTGCGACAACATTAAAAGAGTATCGTCAGATTGAAAAAGATGCTGCCCTT
GAACGCAGGTTCCAGCCTGTCATCGTTGATGAGCCAACACAGGATGAAGCATTCGAGATCTTAAAAGGCATTCAGGATAA
GTATGAAGCCTATCATGGCGTCACCTATTCTGACGAAGCCATTAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGCCACTTGCCAGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAATTAACAAACCGTCTTGCGCAAATTGCCGCTGAAAAACAAGCTGCTTTAAATGAAGAACGATATGAAAAAGC
AGCGAAGCTTCGAGACGAAGAAGAAGCGATTGAAGCGAGATTGCAAAACAAAACAAATGACAAAGAACATGTCGTCACAG
CTGAGGACATTCAGTCGATTGTAGAACAAAAAACAGGTATCCCTGTCGGCAAACTACAAGCAGACCAACAAACAAAAATG
AAAGAAATTGATGTCCGCTTAAAAGCCCGCGTCATTGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCCGTAAAAAG
AAGCAGAGCCGGCTTAAAATCAAAACATAGACCAACTGGCTCCTTCCTTTTCGTTGGGCCAACAGGCGTCGGGAAAACCG
AATTGTCTAAAACATTAGCGGAAGAATTATTTGGCTCAAAAGAAGCGATCATTCGTTTAGATATGAGTGAGTACATGGAG
AAACATTCCGTGTCCAAAATCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCCGGACAGCTCACGGAAAAGGT
TCGCAGAAAACCATACAGCATCATTTTGCTCGATGAAATCGAAAAAGCGCACCCTGATGTCCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGTCTAACAGACAGCCAAGGCCGAACCGTCAGCTTTAAAGACACAGTCATCATTATGACAAGTAAC
GCTGGCAGCACAGATAAAAAAGCAGTCAAAGTCGGATTCCAGTCTGAACAAGAAGAAGCCATCGAAGAACAATCATTAAT
TGATTCATTGAGCGCTTATTTCAAACCGGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGATAAAG
ACGATTTAGTCAAAATTGTGGATCTTCTGCTCAAAGATTTGTCAGAGCAGTTAAAAGAACAAAATCTAACTGTTCACGTC
ACAAACGAAGCGAAAGAAAAAATCGCTGAACTTGGTTATCATCCAGCATTTGGGGCTCGTCCGTTACGAAGAACGATTCA
AGAGCATGTTGAGGATCAAATGACGGACATCTTGCTTGAAGAAGAACAACTTACTGGATTTACAGTCGATGTTGAACATG
ACGAAATTGTTGTGAAAAAGAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.969 |
100 |
0.601 |
| clpE | Streptococcus mutans UA159 |
56.51 |
100 |
0.601 |
| clpE | Streptococcus pneumoniae Rx1 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae D39 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae R6 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.846 |
100 |
0.579 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.502 |
95.72 |
0.512 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.698 |
90.728 |
0.424 |
| clpC | Streptococcus thermophilus LMD-9 |
44.427 |
92.154 |
0.409 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.272 |
92.154 |
0.408 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.479 |
90.442 |
0.402 |
| clpC | Streptococcus pneumoniae Rx1 |
44.674 |
89.729 |
0.401 |
| clpC | Streptococcus pneumoniae D39 |
44.674 |
89.729 |
0.401 |
| clpC | Streptococcus mutans UA159 |
44.127 |
89.872 |
0.397 |